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reef3d

Scripts for 3D reconstructions (Photoscan) and data analysis (e.g., structural complexity, surface area, volume)

reefmodengine.jl

A Julia interface to the ReefMod Engine API

reefscan-data-model

reefscan-inference-eod

End of day inferencing for reefscan

reefscan_desktop_data_manager

reefscan_inference

Python program for inferencing a batch of images on a local PC

reefscan_photo_chunker

Small project for geographic sections of a photo survey

ros_reefscan_cots_detector

rrap-dg

Data generation processes for AIMS-RRAP

sedmon

An R package for the analysis of the Darwin Harbour sediment monitoring program

seriatopora_analyses

Analyses in support of a project exploring what has happened to Seriatopora within the GBR

shinybayesnec

This shiny provides a web interface for bitting bayesnec models in R

sponge-larvae-condensate-toxicity

ssd_weight_methods

The repro houses simulation testing studies of different weighting methods for model averaging of SSDs

ssddata

Species Sensitivity Distribution Data

ssdtools

An R package to fit and plot species sensitivity distributions.

stats-library

A collection of resources curated by the AIMS stats team.

stats_helpers

Collection of functions and examples to help with statistical models and diagnostics

status

R package for reporting analysis status

team_research

colelciton of scripts to generate various summary outputs from a research group

toxval

tropical_ucrit_data

This repository houses a dataset and code relating to the swimming speeds of larval and settlement stage tropical coral reef fishes

tweedie

Workspace for the brms implementation of the tweedie distribution with power parameter in [1, 2] a.k.a. tweedie compound poisson, compound poisson-gamma (CPG) distribution.

upper-limits-of-coral-cover