Comments (1)
@Blanch-Font my apologies for the delayed response. I had an old email in github and I missed new issues until I checked to make changes today. This will be fixed in Capr v1.0.3. It is an error in the S4 class generation, the guid was getting stuck as the same id.
The change comes here:
setClass("ConceptSetExpression", slots = c(id = "character", Name = "character", Expression = "list"))
and here
createConceptSetExpression <- function(conceptSet, Name, includeDescendants =TRUE,
isExcluded =FALSE, includeMapped = FALSE){
concepts <- createConceptSet(conceptSet = conceptSet,
includeDescendants = includeDescendants,
isExcluded = isExcluded,
includeMapped = includeMapped)
#create the a new concept set expression from the concept set, this also sets the guid concept id
cse <- new("ConceptSetExpression", Name = Name,
Expression = concepts)
#create guid for new cse
cse@id <- uuid::UUIDgenerate()
#attach the concept set expressions to a component class object
comp <- createComponent(Name = Name,
ComponentType = "ConceptSetExpression",
ConceptSetExpression = list(cse))
return(comp)
}
Note the function createConceptSetExpressionCustom
will also be fixed for the same issue
from capr.
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