Related Issues (20)
- Problems with scripts referenced using the ${workflow.projectDir} variable HOT 1
- Add support for RNAse-R effect correction
- CIRIquant test fails since commit 72dd514, PR #104 HOT 3
- Add support for full length circRNA sequence detection
- Unexpected error [StackOverflowError] HOT 2
- Timeout waiting for connection from pool HOT 2
- Add bioconda recipe for `psirc`
- Process exceeded running time limit (16h) HOT 2
- conda recepies HOT 8
- Not a valid path value: 'null' HOT 1
- Wrong BWA index directory in references HOT 7
- Issues generating, and pointing to, genome reference data lead to early crashes during configuration (w/ fix(?)) HOT 3
- Not all samples are used in analysis resulting in pipeline failur HOT 7
- Problem in running circrna HOT 2
- Limitted input length. HOT 2
- STAR, CIRIquant, DCC errors during pipeline run HOT 5
- Fix problems with outdated STAR indices in iGenomes HOT 1
- Implement coding potential analysis
- mapsplice error when input fasta file contains multiple fields in the header
- Implement improved annotation of hits also in the DIFFERENTIAL_EXPRESSION:PARENT_GENE process HOT 1
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from circrna.