neksa Goto Github PK

methylation-project

ml101

intro to machine learning - reverse engineering phenomena

mlcourse_open

OpenDataScience Machine Learning course (yet Russian-only)

molecule_discovery

matter.farm, 7x7 beijing project w/ Sean Raspet

molmimic

Predict Host Pathogen Protein Protein Interactions using 3D Fully Convolutional Neural Networks

mutabindv2.0

dataset for MutaBindv2.0

mutagene

Python library and package for mutational analysis

mutagene-demo

neksa.github.io

openfda-faers

FAERS Adverse Reaction Events database and OpenFDA API

opentargets-py

Python client for the Open Targets REST API at targetvalidation.org

pdbspheres

pdbtools

A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files

poetry

Python dependency management and packaging made easy.

practical-data-science-cookbook-second-edition

Code repository for Practical Data Science Cookbook, Second Edition, published by Packt

protein-sequence-motifs

Tools to derive prototypical sequence motifs of functional and structural protein units of sub-domain size

protein_family_classifier

pymine

A PyMOL plugin to integrate and visualize data for drug discovery

python-machine-learning-book-2nd-edition

The "Python Machine Learning (2nd edition)" book code repository and info resource

python_plotting_snippets

Tips and tricks for plotting in python

pythondatasciencehandbook

Jupyter Notebooks for the Python Data Science Handbook

pyuniprot

Python package to query and analyse UniProt

reproducible-research-guidelines

Guidelines for accountable and reproducible computational research

rmotifx

Discovery of biological sequence motifs in R

scipy

Scipy library main repository

siftr

Predicting the impact of mutations on protein function

speck

Browser-based WebGL molecule renderer with the goal of producing figures that are as attractive as they are practical.

spserver

Assessment of the quality of protein folds and protein-protein interaction interfaces using statistical potentials

tracksig

A framework to infer mutational signatures in cancer over time

twobitreader

A fast python class for reading 2-bit files (used by UCSC genome browser)