muzaffarabdullaev / sequencetools

The 'sequencetools' R package

sequencetools

An R package for processing genetic code and seqeuence data

sequencetools includes several tools for DNA and RNA sequence manipulation:

• seqcheck() - The type of nucleic acid that a given sequence corresponds to.
• seqcomplement() - The complementary or reverse complementary sequence of an input sequence.
• seqcomposition() - The composition of a given sequence (percentage of a specific base or GC-content).
• seqlength() - The length of a given sequence
• seqlocator() - The location and number of instances of a specified sequence within a larger input sequence.
• seqsummary() - A summary of the type, length, and composition of a given sequence.
• seqtranscribe() - The transcribed version of a given sequence (DNA -> RNA or RNA -> DNA)
• seqtranslate() - The primary amino structure of a given RNA sequence (1-letter or 3-letter code)

$${\color{red}Note: \space More \space Functions \space Coming \space Soon!!}$$

Installation

sequencetools can be installed from github using:

install.packages("remotes")
remotes::install_github('muzaffarabdullaev/sequencetools')

Alternatively, install using:

install.packages("devtools")
devtools::install_github('muzaffarabdullaev/sequencetools')

Status and Contribution

This package is currently under early stage development.

⭐ Contribution is highly welcome! ⭐

If there are problems with the package, feel free to let me know!

Code of Conduct

Users and Contributors should read the "CODE_OF_CONDUCT.md" file before posting feedback/changes to the repo.
Thank you!