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hnbr-generation's Introduction

hnbr-generation

Python routines to hydrogenate and cross-link nitrile butadiene rubber

lmp2nx.py

turns LAMMPS data file containing polymer into a network

nx2opls.py

infers OPLS atom types as well as bonded/non-bonded force-field information from network, e.g., mass of 1 -> hydrogen etc.

gmx/

contains OPLS force-field information, reproduced from GROMACS v5.0.1

cross_link.py

hydrogenates/cross-links NBR into HNBR, based on user-defined cross-link fraction

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