munibh / uninstructedmovements_v2

my private repo to organize all the code i've written, b/c it was getting out of hand in the economo-lab repo

uninstructedMovements_v2

TODO

• new code for kinematics
• new code for kaufman
• new code for pca
• new code for ta-elsayed
• new code for st-elsayed
• need JEB14 Motion Energy
• calc move and non-move time points as in. -- How they automated finding 'quiet' trials in Zencai's paper: "Trials with mean motion energy during the delay epoch lower than a threshold were defined as quiet trials. The threshold was calculated as the pre-sample (1s) mean motion energy minus 0.8 times standard deviation. These quiet trials with little movement in jaw, whisker pad and nose accounted for 3.9%, 9.7% and 1.4% of all trials, respectively." -- could be good but assumes little motion in presample period