mtmorgan Goto Github PK

cfncluster-notes

PDF's about using bioconductor on cfncluster with batchtools

cgbtutorial

Working with Cancer Genomics Browser data in R / Bioconductor

chimeraviz

chimeraviz is an R package that automates the creation of chimeric RNA visualizations.

civic

Half-baked package to query CIViC

client-apis

Clients for Python, R, javascript that interact with [terra, gen3, galaxy, others]

csama

Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology

curl

A Modern and Flexible Web Client for R

cxgcensus

Alternative access to CELLxGENE census data

data-portal

data.table

R's data.table package extends data.frame:

dbplyr

Database (DBI) backend for dplyr

decd

A R package for differential expression analysis and exploratory investigation to complex disease using big data

devtools

Tools to make an R developer's life easier

dirichletmultinomial

dplyr

Dplyr: A grammar of data manipulation

dt

R Interface to the jQuery Plug-in DataTables

elbo

A great conversation starter

enmix

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ENmix.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ENmix.

ensembldb

This is the ensembldb development repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ensembldb.html Contributions: https://github.com/jotsetung/ensembldb. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ensembldb or https://github.com/jotsetung/ensembldb/issues.

es_se

excluster

ExCluster current version 0.99.x for bioconductor submission review

exploringhcacxg

Use R / Bioconductor to explore and use Human Cell Atlas and CellXGene data resources

f1000r_biocworkflows

Project for publishing from Bioconductor to F1000R and back

futile.logger

A logging package in R similar to log4j

gaprediction

genomicfeatures

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/GenomicFeatures.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=GenomicFeatures.

git-bioc

:octocat: Git commands to keep a Git repository and Bioconductor SVN in sync

githubcribsheet

Notes and tips for using github with Biocondcutor

gpumagic

An R interface to write OpenCL functions

grantpubcite

Query NIH Reporter and iCite for grant and publication information