Coder Social home page Coder Social logo

modeldbrepository / 267594 Goto Github PK

View Code? Open in Web Editor NEW
0.0 4.0 1.0 1.81 MB

LGMD - ON excitation to dendritic field C

Home Page: https://modeldb.science/267594

AMPL 100.00%
locust-lobula-giant-movement-detector-lgmd-neuron active-dendrites-detailed-neuronal-models-spatio-t neuron-simulator

267594's Introduction

This is the NEURON model code used in "Contrast-polarity specific mapping improves efficiency of neuronal computation for collision detection", available at https://doi.org/10.7554/eLife.79772. This model adapts previous LGMD models to investigate the influence of newly discovered ON excitation impinging on dendritic field C.

The modeling is described in Figure 7 and accompanying text in the article. There are in cluded scripts that reproduce the simulations of each figure panel named "Fig7B.hoc", "Fig7C.hoc", "Fig7D.hoc", and "Fig7E.hoc". There is also a simple gui window for loading each script created by "mosinit.hoc".

All model code was written in hoc and simulations were conducted in NEURON version 7.7, but we believe that nothing in the code is version specific.


Auto-launch or Compile special:
The LGMD model uses several custom .mod files for channels and currents. If the auto-launch link does not compile a special executable version of NEURON with the additional membrane mechanisms, use the mknrndll application or nrnivmodl binary as described below.

cd LGMD_2022       # change path to location on your computer with downloaded files
nrnivmodl ./mods   # compile special executable 
x86_64/special ./mosinit.hoc -    # execute Neuron and initialize

267594's People

Contributors

alexsavulescu avatar

Watchers

Tom Morse avatar Robert A McDougal avatar  avatar  avatar

Forkers

opensourcebrain

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.