mmaltafe / orchestra

Orchestra

Setup your own cluster:

If you do not run these steps below before, please follow this section. Before we starts you must set your email to send automatic messanges using external APIs. This messages will be very important to monitoring your job status.

NOTE: All steps here must be run into the LPS cluster.

After that, let's create your orchestra configuration file. First, go to your home dir and create the file .orchestra.json with these attributes:

{
 "postgres":""postgres://db_username:[email protected]:5432/your_db_name"
 "email":"[email protected]"
 "password":"your_email_password"
 "job_complete_file_name":".complete"
}

and save it.

Download the container:

Donwload the image:

singularity pull docker://jodafons/orchestra:base

Run it!

singularity run orchestra_base.sif

and setup all orchstra envs inside of the container:

source /setup_envs.sh

Create your database:

Setup the database:

maestro.py user init

and create your user:

maestro.py user create -n username -e [email protected]

Setup all available nodes:

Let's create one node with name caloba21 with 2 gpus slots and none cpu slots.

maestro.py node create -ec 0 -mc 0 -eg 2 -mc 2 -n caloba21

Now, let's create one node with name caloba51 with 40 cpus slots and none gpus slots.

maestro.py node create -ec 40 -mc 40 -eg 0 -mc 0 -n caloba51

Task Creation:

maestro.py task create \
    -c user.jodafons.my_configs_files \
    -d user.jodafons.my_data_file \
    -t user.jodafons.my_task_tutorial \
    --containerImage $USER/my_orchestra_tutorial \
    --exec "python3 /job_tuning.py -d %DATA -c %IN -o %OUT" \
    --bypass \
    --queue gpu

The --exec command contruction must follow some rules to work:

• The %DATA tag will be substitute by the data file path (storage) into the orchestra. (This tag is mandatory);
• The %IN tag will be substitute by the configuration file (storage) path into the orchestra. (This tag is mandatory);
• The %OUT tag will be substitute by the output file path (storage)into the orchestra. (This tag is mandatory);

NOTE: The --bypass will skip the 10 jobs tester. Do not use this command if you are not sure that your task will works on LPS Cluster.

NOTE: The orchestra allow some custom commands like:

• --exec " . /setup_envs.sh && python3 /job_tuning.py -d %DATA -c %IN -o %OUT", run the setup_envs.sh script if you need to do some other things before start;
• --exec "python3 /job_tuning.py -d %DATA -c %IN -o %OUT && python3 /after_job.py", run the after_job.py script if you need to do some other things in the end;

NOTE: The cluster support multiple queues. The queue name can be:

• gpu: For GPU only;
• cpu: Dedicated jobs with higher cpu consume. Usually one node is allocated to run the job.

Print All Tasks:

maestro.py task list

Delete Task:

This command will remove the task from the orchestra database.

maestro.py task delete --id 0

Retry Task:

maestro.py task retry --id 0