Comments (1)
Hi,
Unless NanoString made a major update of their RCC file format, multiplex data are the same as regular data.
The difference is instead of having "Endogenous", you have "Endogenous1", ..., "Endogenous8" for multiplex, which is parsed and read by NACHO.
For short, it worked before, thus should work now.
If not, please fill an issue with a reproducible example (fake RCC file close to yours for example)
from nacho.
Related Issues (20)
- Provide easy means to export normalized Counts HOT 5
- Documentation / Interface Mismatch HOT 1
- Keys are shared for 2 rows HOT 12
- Add Sanity check for files homogeneity
- Using NACHO for single catridge assays HOT 3
- Background normalization? HOT 1
- Question about sample sheet contents and formatting HOT 3
- Release NACHO 1.0.1
- Move to `data.table` framework HOT 1
- Visualisation after normalise function HOT 2
- Error: invalid first argument HOT 2
- Release NACHO 1.0.2 HOT 1
- Release NACHO 1.1.0
- load_rcc doesnt recognize subfolder HOT 7
- Pos and neg controls in RCC file HOT 3
- Allow named vector for RCC file in `load_rcc`? HOT 1
- Is it possible to upload a sample sheet using the NACHO shiny app? HOT 3
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from nacho.