Comments (2)
Not sure what you mean, the links are all under assembly releases: https://github.com/marbl/CHM13#assembly-releases: "Complete T2T reconstruction of a human genome. Changes from v1.0 include filled rDNA gaps and improved polishing within telomeres. One rare heterozygous variant causing a premature stop codon was changed at chr9:134589924 to the more common allele. Also available at NCBI."
You can download either by clicking the "Complete T2T reconstruction of a human genome" link or the NCBI link.
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Got it!
I was looking for releases or folders. Closing the issue.
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Related Issues (20)
- CHM13 v2 genome accessibility masks for 1000 Genomes data HOT 1
- GTF format of the orignal GFF HOT 7
- SF3B3 gene annotation missing in gff3 HOT 2
- [Feature request] Host a STAR index for this build
- is it a good time for a reference genome switch? HOT 5
- Is there phased 1000g variations data available base on CHM13 HOT 1
- Is mapping the CHM13 from WGS a good idea right now? HOT 1
- GENCODE gene annotation link is stale. HOT 1
- CHM13 liftover chain is incompatible with the import.chain function in R package rtracklayer HOT 9
- Why are PAR regions in X and Y different sizes? HOT 7
- Latest JHU RefSeqv110 + Liftoff v5 gff3 does not pass gff3 validation HOT 3
- Short read alignment to the genome
- Issue with preparing TxDB and GRanges object from GFF file HOT 4
- pseudohomologous regions HOT 4
- Length of chm13v2.0 HOT 2
- mitochondrial genes HOT 1
- Question regarding 41 protein coding genes identified HOT 1
- CpG methylation annotation for CHM13 HOT 6
- m64062_190807_194840 subreads HOT 2
- Missing parent gene entry for EPHA2 HOT 2
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