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cuPC: CUDA-based Parallel PC Algorithm for Causal Structure Learning on GPU

License: GNU General Public License v3.0

R 3.17% Cuda 93.71% C 3.13%

cuda gpu machine-learning pc-algorithm

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bigtestlab benrobby bhavyaghai sera91 jingmingcn stingyl

cupc's Issues

Possible memory error

Hi, I'm really interested in using this method for various aspects of my research.

While running it on a gpu cluster I am receiving the following error:
cudaCheckError() failed at cuPC-S.cu:70 : invalid argument

This happens when the dataGenerator script is set to more than ~250 nodes in the graph, making me think it may be a memory issue.

This is being run on a Titan-X gpu. Any advice would be greatly appreciated.

Is kernel-based conditional indepdence test available in cu-PC?

Hi, thanks for your great work.

I notice only Gaussian CI test is used in the documentation, is kernel-based conditional indepdence test available in cu-PC?

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