laituan245 / bio_relex Goto Github PK
View Code? Open in Web Editor NEWJoint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference
Joint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference
Hi! I'm a researcher from Central South University. Thanks for your great work. I'd like to learn from your work. I have UMLS and MetaMap installed on my device, but I don't know how to extract the five files in your resource folder.
--- umls_embs.pkl
--- umls_rels.txt
--- umls_reltypes.txt
--- umls_semtypes.txt
--- text2graph.pkl
Could you please teach me how to obtain these documents? It would be better if you could directly provide these documents to me. If our work comes to fruition, we will certainly cite your work
I found I couldn't find these five files --- umls_embs.pkl
--- umls_rels.txt
--- umls_reltypes.txt
--- umls_semtypes.txt
--- text2graph.pkl
I have download the UMLS-2020aa-fill file and installed in my device. But I don't know how to use it.
Can you tell me how to get additional files in resources? thank you.
I already send email to you email address. Looking forward to your reply.
您好:
非常感谢您的代码分享,但是我在ulms中没有找到umls_embs.pkl,umls_rels.txt,umls_reltypes.txt, umls_semtypes.txt,text2graph.pkl这几个文件,希望您能分享一下,非常感谢。
Dear Tuan Lai,
I am a researcher at the university of hong kong. I read your great work entitled 'Joint Biomedical Entity and Relation Extraction with knowledge-Enhanced Collective Inference'. I would like to try your great work by the code you provided at Github. However, I found that additional files in the resources folder can not be found.
Could you please help me with accessing them? Many thanks for your help! I will definitely cite your great work when I have some results.
Best,
Xiaolin Han
Hi ~ I would like to ask about the "relations" in each data dictionary in ADE dataset,
eg. "relations":[
{
"type": "Adverse-Effect",
"head": 0,
"tail": 1
}
"orig_id": 83
what does "head: 0" and "tail: 1" mean? and what is "orig_id" ?
Thanks!
Hi,
I can't seem to find the scripts you used to calculate the additional UMLS related files and text2graph.pkl.
I also sent you an email on this matter.
I also hope you could give some insight on how to adapt your work on different datasets (like creating text2graph on different datasets).
Thank you for your work!
I'm sorry to mention this issue,because I didn't find a way to use umls.Can you tell me how to get additional files in resources? thank you.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.