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annexremote-openneuro's Issues

Mis-install

julien-macbook:~/temp $ pip install git+https://github.com/kousu/annexremote-openneuro#egg=annexremote-openneuro
Collecting annexremote-openneuro
  Cloning https://github.com/kousu/annexremote-openneuro to /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/annexremote-openneuro
  Running command git clone -q https://github.com/kousu/annexremote-openneuro /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/annexremote-openneuro
Requirement already satisfied: click>=7.0.0 in /Users/julien/miniconda3/lib/python3.7/site-packages (from annexremote-openneuro) (7.1.2)
Collecting progressbar>=2.0.0
  Downloading progressbar-2.5.tar.gz (10 kB)
Collecting aiogqlc@ git+https://github.com/kousu/aiogqlc.git@nested-files
  Cloning https://github.com/kousu/aiogqlc.git (to revision nested-files) to /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc
  Running command git clone -q https://github.com/kousu/aiogqlc.git /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc
  Running command git checkout -b nested-files --track origin/nested-files
  Switched to a new branch 'nested-files'
  Branch 'nested-files' set up to track remote branch 'nested-files' from 'origin'.
    ERROR: Command errored out with exit status 1:
     command: /Users/julien/miniconda3/bin/python -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/setup.py'"'"'; __file__='"'"'/private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-pip-egg-info-e1w0egba
         cwd: /private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/
    Complete output (35 lines):
    Traceback (most recent call last):
      File "<string>", line 1, in <module>
      File "/private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/setup.py", line 3, in <module>
        setup()
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/__init__.py", line 145, in setup
        return distutils.core.setup(**attrs)
      File "/Users/julien/miniconda3/lib/python3.7/distutils/core.py", line 121, in setup
        dist.parse_config_files()
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/dist.py", line 698, in parse_config_files
        ignore_option_errors=ignore_option_errors)
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 120, in parse_configuration
        meta.parse()
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 425, in parse
        section_parser_method(section_options)
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 398, in parse_section
        self[name] = value
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 183, in __setitem__
        value = parser(value)
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 513, in _parse_version
        version = self._parse_attr(value, self.package_dir)
      File "/Users/julien/miniconda3/lib/python3.7/site-packages/setuptools/config.py", line 348, in _parse_attr
        module = import_module(module_name)
      File "/Users/julien/miniconda3/lib/python3.7/importlib/__init__.py", line 127, in import_module
        return _bootstrap._gcd_import(name[level:], package, level)
      File "<frozen importlib._bootstrap>", line 1006, in _gcd_import
      File "<frozen importlib._bootstrap>", line 983, in _find_and_load
      File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
      File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
      File "<frozen importlib._bootstrap_external>", line 728, in exec_module
      File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
      File "/private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/aiogqlc/__init__.py", line 1, in <module>
        from aiogqlc.client import GraphQLClient
      File "/private/var/folders/s8/4qnm5q1n261ch35b5kkclsb00000gn/T/pip-install-ho498o10/aiogqlc/aiogqlc/client.py", line 1, in <module>
        import aiohttp
    ModuleNotFoundError: No module named 'aiohttp'
    ----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.

Maybe related to using conda??

BIDS Validator

The website won't let you upload an invalid dataset and neither will the other CLI. The API does just fine, but that's not the point. We should integrate a BIDS validator and refuse to upload an invalid dataset, too, or at least warn about it.

We could let it be overridden by --force, but it would be a good thing to catch by default.
Though this would also add another dependency, so maybe I don't like that.

Parallel transfers?

Is there an elegant way to get parallel downloads or even uploads to work?

Make `openneuro` its own project

openneuro.Client and openneuro-cli should live in a separate repo that this depends on, instead of being stuffed inside of here.

Progress bars in `openneuro-cli`

It would be good to have a -v or --progress like rsync to show the state of uploading/downloading.

(alternately, write a PyFUSE layer instead, and then you can actually use rsync).

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