kirchhausenlab / incasem Goto Github PK

When running the predict.py script, I ran into the following issues:

1. configargparse was not included in the incasem environment, which could be solved with pip install configarparse

2. Then I got the following error:
   TypeError: Descriptors cannot not be created directly. If this call came from a _pb2.py file, your generated code is out of date and must be regenerated with protoc >= 3.19.0. If you cannot immediately regenerate your protos, some other possible workarounds are: 1. Downgrade the protobuf package to 3.20.x or lower. 2. Set PROTOCOL_BUFFERS_PYTHON_IMPLEMENTATION=python (but this will use pure-Python parsing and will be much slower). More information: https://developers.google.com/protocol-buffers/docs/news/2022-05-06#python-updates
   This could be solved with pip install 'protobuf~=3.19.0'