kids-first Goto Github PK
Name: Kids First Data Resource Center
Type: Organization
Bio: Working Together to Put Kids First
Blog: http://kidsfirstdrc.org
Name: Kids First Data Resource Center
Type: Organization
Bio: Working Together to Put Kids First
Blog: http://kidsfirstdrc.org
This is a port of MSKCCs vcf2maf repository, release v1.16.19. We have modified their Dockerfile and dropped deprecated fields from their maf output to suit the needs of Kids First and pedcBioportal
🚧 Imports into the experimental Kids First OMOP Database
:family: Build pedigree files from Kids First Data
kids-first persona implementation
:factory: Extract-Transform-Load Pipeline for producing data for the Kids First Data Resource Portal
Extract id and names from owl files
:white_check_mark: A template for a microservice written in Java and a resource server under Ego with JWT authorization
:bar_chart: The Kids First Data Resource Portal and Social Network User Interface
🏷 Tool to author software releases for Kids First
:microscope: RNA-Seq workflow for Kids-First DRC
:microscope: Somatic workflow for Kids-First
💄 Kids First Sphinx Docs Theme
:fire: Kids First FHIR ETL Task Service running against Dataservice
:hammer: Reference Task Service implementation
📈 Generate data reports per release
:stars: Snapshot Task application running against Release Coordinator
👨⚕️ An application to collect study data and report on study status
💡📊 Prototype FHIR data dashboard - what's in my FHIR server?
📆 Interface to the Release Coordinator
🎨 Design System for Kids First
🛠 dbGaP sample consent status processor for the Kids First project
API to manage users
🛠 Collection of reusable Python utilities related to the Kids First project
Bioinformatics workflows for Kids First DRC
Customization of Apache Zeppelin for KF
Contain theme for zeppelin UI customization
Benchmarking tools and workflows
Kids First and Sentieon collaboration to bring a relatively easy and affordable joint calling workflow to CAVATICA
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