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bpod

Open source rodent behavior measurement and control

bpod_r0_5

Open source behavior measurement and control

bpodfunctions

Useful Bpod Functions.

bpodprotocols_nosepoke

bpodprotocols_olf2afc

Olfactory discrimination 2AFC task.

cellbase

Matlab-based data base and analysis functions for neural recordings.

choiceballsystem

cuedoutcome_sensors

Sensors project Bpod behavior and plotting

detection2afc_rdk_usv_conf

dual2afc_rdk_usv_stconf

ellipticalclustering

gittutorial

gui

Software for electrophysiology data acquisition

mclust

David Redish's MClust, forked from v3.5 and adapted by Hyun Jae Pi to work with data output by SpikeGadgets

mclust_4_4

Modifications to David Redish's MClust4.4 to accomodate 32ch NNx probes acquired with SpikeGadgets

mountainsort_matlab_wrapper

mountainsort_metrics_package

neuropixels_preprocessing

Preprocessing pipeline for Neuropixels recordings using kilosort, additional cluster metrics, Phy2, and export functions to cellbase

nosepoke_invest

bare bones time estimation task

sensors-behav-test

metric for CuedOutcome behavior performace. developed by SSt

sunkcostmodel

Apparent sunk cost effect in rational agents

switch_dual2afc

Based on 2AFC with 4th port for self-paced block switches

switchnosepoke

Nosepoke foraging task with a 4th port that "resets" the patch contingencies

taskmatching

Submodule for Bpod protocol MATCHING, a 2AFC in which information about which choice will be rewarded is provided probabilistically by trial history.

tasksuite_analysis

Analysis code for data generated by behavioral tasks of TaskSuite

tasksuite_nb

Notebooks analyzing TaskSuite behavioral data