Error with GPU/CUDA about autohic

[Jwindler]

Thank you for your response.
If you want to use GPU, please install CUDA-11.3 and cuDNN-8.2 before.
For AutoHiC with GPU support, you need to be under the above CUDA version and use conda to reinstall AutoHiC.
If there are no special requirements, it is recommended to use AutoHiC in the CPU environment, which does not change the speed much, because the time limit is mainly concentrated on juier and 3d-dna.

[kiratalreja3]

Thanks, I will try that. From my testing, it seems the GPU mode is exponentially faster than CPU mode in onehic mode - where my job finished in 40 mins on GPU mode and more than 16 hours on CPU mode.

[kiratalreja3]

Is there a scope of extending the development to YAHS? I am happy to contribute.

[Jwindler]

Thank you for your response. We are currently working on this development. If you have any good suggestions, I hope you can keep in touch with me.

[Jwindler]

Is there a scope of extending the development to YAHS? I am happy to contribute.

maybe you can ref to : https://github.com/Jwindler/AutoHiC/blob/main/example/other_tools.md

[zhangwenda0518]

Hello, teacher,
I would like to ask how to check whether my server supports and uses GPU acceleration. I looked up the command lspci | grep -i VGA on the Internet.
My server shows:
62: 00.0 VGA compatible controller: Matrox Electronics Systems Ltd. Integrated Matrox G200EW 3 Graphics Controller (Rev 04).

Does this mean that my server can use GPU acceleration? What should I do next?
Thank you！

[Jwindler]

Hello, teacher, I would like to ask how to check whether my server supports and uses GPU acceleration. I looked up the command lspci | grep -i VGA on the Internet. My server shows: 62: 00.0 VGA compatible controller: Matrox Electronics Systems Ltd. Integrated Matrox G200EW 3 Graphics Controller (Rev 04).

Does this mean that my server can use GPU acceleration? What should I do next? Thank you！

You should make sure that your machine has a graphics card, and install the appropriate driver and CUDA, consulting the documentation for tips. @zhangwenda0518