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presentations

prowes

Proxy service for injecting middleware into WES requests

py-ga-mob

PYGA: Python Google Analytics - Data Collection API

pyconcorde

Python wrapper around the Concorde TSP solver

pyconcorde-build

Automated builds of the Concorde TSP solver

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

pyston

An open-source Python implementation using JIT techniques.

python-historic

python-tds

A Python wrapper around TaxDataSystems SOAP API

python-tutorial-files

Supplementary material for the Introduction to Python tutorial at EuroScipy 2015

react-sigma

Lightweight React library for drawing network graphs built on top of SigmaJS

repeat

Really simple Python script to repeat a command indefinitely.

scikit-bio

scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.

scikit-bio-cookbook

Recipes for bioinformatics analyses with scikit-bio

scikit-image

Image Processing SciKit (Toolbox for SciPy)

scikit-image-web

scikit-image web page sources

scipy

Scipy main repository

se2-curve-matching

Matching of planar curves using the Euclidean group

seaborn

Statistical data visualization using matplotlib

snippets

All sorts of weird stuff

statistics-apps

Shiny apps to support the course on Probability and Statistics at GUGC, South Korea

statistics-playground

stow

GNU Stow - mirror of savannah git repository occasionally with more bleeding-edge branches

sympnets

tmtools

Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.

todo-visualization

Tools to visualize todo list

unittest-autocomplete

Bash autocompletion for Python unittests

unittest-mode

Minor mode for running python unittests in emacs

vpsearch

Microbiome code for opensourcing

vpsearch-paper

Manuscript, benchmark code, and supplementary material for the paper "VPsearch: a package for fast exact similarity search".