Written by Yuanhe Guo ([email protected])
A beginner guide for getting started with running python on nyu greene hpc.
Each time I want to setup a new environment on NYU Greene HPC, I have to go through the official documentation and search for the commands I need. Meanwhile, there exist quite a few common issues whose solutions are not covered by the offical documentation. So I decided to write a cheatsheet for myself and others who may need it.
I wrote some complex commands into bash scripts, so that getting python run flawlessly on NYU Greene HPC is as simple as ordering a burger in a fast food restaurant.
Check the wiki page to get started.
- The official documentation: HPC Home
- I started my journey with HPC by following HPC Notes by Hammond Liu
Please feel free to open an issue if you have any questions or suggestions.
- Prereq
- Apply for NYU Greene HPC access
- Basic Linux commands
- Vim
- Vscode
- Quick Starting Pack
- Connect to HPC
- Request CPU/GPU Sessions
- Interactive sessions for conda
- Jupyter Notebook
- Batch jobs
- Manual Setup
- Offical guide Index
- Trouble Shooting
- How can I quit python/singualrity/runtime?
- How can I jump back when kicked off by accident?
- Disk quota exceeded
- Could not login server through vscode
- Out of Memory Error
- Could not open singularity environment
- Some linux commands could not be executed
- Useful Tricks
- Setup bashrc
- Setup ssh key pairs
- File management commands
- Access through iPad
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