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netspeed

An extension for gnome 3 to show internet speed

nf-encyclopedia

A NextFlow pipeline for chromatogram library DIA proteomics workflows

open_speclib_workflow

pandoc-beamer-handouts

A template to make handouts and slides from a pandoc document and beamer

pbs-torque

peptides

An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.

perseusr

R package for easy interop between Perseus and R

pmultiqc

A library for QC report based on MultiQC framework

programmingassignment2

Repository for Programming Assignment 2 for R Programming on Coursera

prosit

Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7

proteometools_fasta

proteomics_datasamples

proyecto-marina

Marine Biology Project whose objective is to automate as much as posible the analisis of wave patterns using R programming Language

purdue_webpage

repo for my personal webpage

pydantic-avro

This library can convert a pydantic class to a avro schema or generate python code from a avro schema.

pydocstringformatter

Automatically format your Python docstrings to conform with PEP 8 and PEP 257

pydocstringformatter_app

pymotifcluster

Clusters sequences based on the shared nmers

pymotifgui

A graphical interface for my motif clustering package

pytorch-lightning

The lightweight PyTorch wrapper for high-performance AI research. Scale your models, not the boilerplate.

quizscrambler

Pyton CLI to generate randomized quizes for students not to cheat

randoms

random MS proteomics scripts that I've used more than once

reflex

🕸 Web apps in pure Python 🐍

repdata_peerassessment1

Peer Assessment 1 for Reproducible Research

rustyms

A rust library for parsing Pro Forma peptides and matching them against MS spectra

sage

Proteomics searching so fast it feels like magic

sc_rnaseq_utils

sctree

Tree based marker finding and gating visualization for single cell rna seq data

sdrf-pipelines

A repository to convert SDRF proteomics files into pipelines config files

setup_sway