Comments (1)
Note, tnseq has initial code for calc_fitness already built. Needs normalization.
from aerobio.
Related Issues (15)
- WGseq phase-2 flow needs better parallelism HOT 2
- Flow graph should be rewritten using Specter
- Generate experiment sheets?
- Validate no repeating replicates HOT 1
- Replicate ID's - allow more than a single character HOT 2
- Validation for missing replicates in Tn-Seq comparisons
- config.clj file missing? HOT 14
- Split off flow graph to separate lib
- Need to build a specification verification system for all experiment sheets HOT 8
- Need RErun command which resets data areas and experiment DB information HOT 1
- Flow for making STAR indices from reference genome files
- Completion emails (any?) should always include relevant EID
- Make `replicates` the default; add new `combined` modifier HOT 1
- Use GTFs in TnSeq analysis
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from aerobio.