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Jorik van Rijn photo

jrijn Goto Github PK

followers: 4.0 following: 5.0 repos: 14.0 gists: 4.0

Name: Jorik van Rijn

Type: User

Company: Prinses Máxima Center

Bio: Postdoctoral researcher studying host-pathogen interactions with Mikael Sellin and T-cell leukemia/lymphoma with Stefan Nierkens.

Twitter: JorikvRijn

Location: Utrecht, the Netherlands

  • 👋 Hi, I’m @jrijn
  • 👀 I’m interested in biomedical science & data analysis
  • 🌱 I’m currently learning Python and R
  • 💞️ I’m looking to collaborate on ...
  • 📫 How to reach me [email protected]

Jorik van Rijn's Projects

cellocity icon cellocity

Scientific software for analysis of confluent cell dynamics.

fijitools icon fijitools

FijiTools2020 is a collection of tools designed for use in ImageJ/Fiji. The code was written for the analysis of microscopy images in the lab of Mikael Sellin, Uppsala University. Some of the scripts are meant to work in conjunction with a separately performed Trackmate analysis.

get icon get

HACS download script

jrijn icon jrijn

Config files for my GitHub profile.

opencv icon opencv

Getting to know image analysis with opencv and tifffile.

organoid-counter-imagej icon organoid-counter-imagej

Imagej macro for counting the the number of organoids in a brightfield image and measure the area of each object.

rsome icon rsome

R package for analyzing qPCR data

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