Comments (6)
Are you still having trouble with this? Both my OS X and Linux installs were able to read your configuration file.
from ddocent.
Yes still having issues - I just tried updating dDocent and trying again, but I still get the same error.
from ddocent.
Can you send me (as an attachment) your exact file?
from ddocent.
Or course! Here it is:
Thanks for your help!
from ddocent.
Your file has windows end line characters. It needs to have unix end line characters. You can use an advanced plain text editor to do this for you or the program dos2unix
on your linux system.
from ddocent.
Ahh! Thanks.
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Related Issues (20)
- Downgrade conda vcftools version dependency HOT 2
- Program stuck in using BWA mapping reads HOT 2
- please make a new release on github HOT 1
- ReferenceOpt.sh - kopt.data output HOT 1
- Use bedops instead of bedools merge for memory efficiency HOT 5
- miniconda recipe with samtools bug? HOT 1
- CD-HIT runs forever / never finishes HOT 2
- Very inefficent scan of full reference genome HOT 2
- performance bottleneck HOT 1
- Suggested parameters for bam filtering HOT 5
- fastp v 0.19.5 issue
- remove duplicates prior to variant calling HOT 2
- ulimit silent error (bug) HOT 1
- missing data in merged vcf file HOT 1
- too many arguments for ls and rm
- Genomic interval creation failed HOT 3
- sh: /dev/tty: No such device or address HOT 1
- #'head: cannot open 'reference.fasta' for reading: No such file or directory' while running denovo assembly HOT 3
- Question about ErrorCount.sh HOT 1
- Info about the number of mapped reads etc. HOT 5
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