jpuritz Goto Github PK
Name: Jon Puritz
Type: User
Bio: Associate Professor at the University of Rhode Island
Location: Kingston, RI
Blog: marineevoeco.com
Jon Puritz's Projects
anuditverma.github.io
Anudit Verma's blog
bcbio.variation
Toolkit to analyze genomic variation data, built on the GATK with Clojure
bio_594
Class repo for BIO 594 Spring 2024
bio_594_2018
Repository for BIO 594
bio_594_2019
Repository for BIO 594 Spring 2019
bio_594_2022
Class repo for BIO 594 Spring 2022
bio_594_2023
bioconda-recipes
Conda recipes for the bioconda channel.
clusterprofiler
:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters
dataskillz
ddocent
a bash pipeline for RAD sequencing
diversity-online
This repository contains the source files for the diveRsity-online web app
dwd-sample-readme
a sample README
eecseq
Protocol for Expressed Exome Capture Sequencing
eems_calcar
EEMS analysis
fishr
fishR website
freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
gdown.pl
Google Drive direct download of big files
genotype_plot
A set of functions to visualise genotypes based on a VCF
hyrad
Hybridization capture protocol using RAD-seq fragments as probes: lab protocols and bioinformatic pipeline.
jpuritz.github.io
Build a beautiful and simple website in literally minutes. Demo at http://deanattali.com/beautiful-jekyll
linuxclass
mes_puritz_lab_notebook
Puritz Lab Online Notebook
meth_compare
nace_mas_genomics_workshop
The website for the Genomics Workshop hosted at the 2024 NACE/MAS Meeting in Providence, RI
ntu-workshop
Repository for the NTU Workshop on Next-Generation Sequencing
ostrea_popstructure
This repository contains code and notebooks detailing preliminary analyses of Genotype-by-Sequencing (GBS) data in the Olympia oyster (Ostrea lurida).
outflank
A procedure to find Fst outliers based on an inferred distribution of neutral Fst
pcadapt
pcadapt has been developed to detect genetic markers involved in biological adaptation. pcadapt provides statistical tools for outlier detection based on Principal Component Analysis (PCA).
ppp_lab
Recipes and Protocols for the shared lab of Hollie Putnam, Jon Puritz, and Carlos Prada
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