Coder Social home page Coder Social logo

jianqingzheng / xbcr-net Goto Github PK

View Code? Open in Web Editor NEW
30.0 30.0 2.0 9.93 MB

Code for "Deep learning-based rapid generation of broadly reactive antibodies against SARS-CoV-2 and its Omicron variant" (Cell Research)

Home Page: https://www.nature.com/articles/s41422-022-00727-6

License: Apache License 2.0

Python 65.03% Jupyter Notebook 33.36% TeX 1.61%
antibody-sequence b-cell-receptor deep-learning keras-tensorflow tensorflow

xbcr-net's People

Contributors

jianqingzheng avatar nablaxdelta avatar

Stargazers

 avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar  avatar

Watchers

 avatar  avatar  avatar

xbcr-net's Issues

使用示例文件运行代码的一些报错

在下载了示例文件并按规定设置好路径后,调用语句:

python main_train.py --model_name XBCR_net --data_name Data_S1 --model_num 0 --max_epochs 3 --include_light 0

能运行完,但是并没有输出结果:

运行train指令的结果
然后再去运行infer指令:

python main_infer.py --model_name XBCR_net --data_name Data_S1 --model_num 0 --include_light 0

则是出现了如下的报错:

运行infer的报错

不太清楚造成这种情况的具体原因,若能得到您的指点不胜感激

Will it work for nanobodies?

Will this work for nanobodies?

I thought it might because of the flag --include_light but that option doesn't seem to have any effect. I looked at the code and can't see that it is actually used anywhere.

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.