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dmpfold

Extending genome-scale de novo protein modelling coverage using iterative deep learning-based prediction of structural constraints

dp_python

Optimized Dynamic Programming (Dynamic Time Warp) as a Python external

dynamic-programming

A collection of interesting dynamic programming problems

emoji-cheat-sheet

A markdown version emoji cheat sheet

equivariant-network-papers

"Popular culture is a place where pity is called compassion, flattery is called love, propaganda is called knowledge, tension is called peace, gossip is called news, and auto-tune is called singing."― Criss Jami

exposure

Learning infinite-resolution image processing with GAN and RL from unpaired image datasets, using a differentiable photo editing model.

fast-wavenet

Speedy Wavenet generation using dynamic programming :zap:

ffpredgan

Improving protein function prediction with synthetic feature samples created by generative adversarial networks

frag-manuscript

getcontacts

Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation

github

Just a place to track issues and feature requests that I have for github

github-classroom-introductory-assignment

Template for creating a GitHub Classroom assignment that assesses a student's ability to use a GitHub Classroom assignment.

github-repo-stats

GitHub Action for advanced repository traffic analysis and reporting

google-research

Google Research

gpcr-string-method-2019

hdbscan

A high performance implementation of HDBSCAN clustering.

hsmbiophysicalproteinpeptidenetworkmachinelearning

Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."

ibm3202

Google Colab Tutorials for IBM3202

inflecs-free-energy-clustering-tutorial

Python tutorial for estimating and clustering free energy landscapes with InfleCS.

jhml.github.io

A Jekyll theme for academia

jhmlam.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

jlab

keras-gan

Keras implementations of Generative Adversarial Networks.

lap

Linear Assignment Problem solver (LAPJV/LAPMOD).

latexjournaltemplates

Template for creating a new journal article format for Quarto

masif

MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.

matching-networks

Matching Networks for one-shot learning in tensorflow (NIPS'16)

matchingnetwork

Implementation of "Matching Networks for One Shot Learning" in Keras https://arxiv.org/abs/1606.04080

matchingnetworks

An attempt at replicating the Matching Networks for One Shot Learning in Tensorflow - Paper URL: https://arxiv.org/pdf/1606.04080.pdf

mdp-dp-rl

Markov Decision Processes, Dynamic Programming and Reinforcement Learning