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Molecular dynamics package designed for the SIESTA DFT code.

License: GNU Affero General Public License v3.0

Python 88.26% C++ 5.99% Cython 5.76%
aimd molecular-dynamics neuroevolution-potential siesta

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./somd/potentials/src/nep.cpp:1233:31: fatal error: NEP_CPU/src/nep.cpp: No such file or directory

When installing somd, I encountered an error after running 'Python setup. py install' as follows:

g++ -pthread -B /data/home/wuxingxing/anaconda3/envs/gpumd/compiler_compat -shared -Wl,-rpath,/data/home/wuxingxing/anaconda3/envs/gpumd/lib -Wl,-rpath-link,/data/home/wuxingxing/anaconda3/envs/gpumd/lib -L/data/home/wuxingxing/anaconda3/envs/gpumd/lib -Wl,-rpath,/data/home/wuxingxing/anaconda3/envs/gpumd/lib -Wl,-rpath-link,/data/home/wuxingxing/anaconda3/envs/gpumd/lib -L/data/home/wuxingxing/anaconda3/envs/gpumd/lib build/temp.linux-x86_64-cpython-310/./somd/core/src/lib.o build/temp.linux-x86_64-cpython-310/./somd/core/src/math_utils.o -o build/lib.linux-x86_64-cpython-310/somd/core/_lib.cpython-310-x86_64-linux-gnu.so -fopenmp
building 'somd.potentials._nepwrapper' extension
creating build/temp.linux-x86_64-cpython-310/somd/potentials
creating build/temp.linux-x86_64-cpython-310/somd/potentials/src
gcc -pthread -B /data/home/wuxingxing/anaconda3/envs/gpumd/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /data/home/wuxingxing/anaconda3/envs/gpumd/include -fPIC -O2 -isystem /data/home/wuxingxing/anaconda3/envs/gpumd/include -fPIC -I./somd/potentials/src -I/data/home/wuxingxing/anaconda3/envs/gpumd/include/python3.10 -c ./somd/potentials/src/nep.cpp -o build/temp.linux-x86_64-cpython-310/./somd/potentials/src/nep.o -std=c++11 -Wall -fopenmp -O4 -march=native
./somd/potentials/src/nep.cpp:1233:31: fatal error: NEP_CPU/src/nep.cpp: No such file or directory
#include "NEP_CPU/src/nep.cpp"
^
compilation terminated.
error: command '/usr/bin/gcc' failed with exit code 1

I checked 'somd/notes/src/NEP_CPU‘ found that this directory is empty. May I know how to install it?

The code used here is https://github.com/initqp/somd Master branch

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