hstrey / mrna-analysis

mRNA-analysis

these are python scripts to analyze single-cell fluorescence time traces after they have been transfection with mRNA using a lipid transfecting agent

Installation instructions: get the anaconda python 3 distribution: https://www.continuum.io/downloads Once you have installed anaconda python go to the console and install the lmfit package: conda install -c conda-forge lmfit if that does not work try: pip install lmfit

Also install git on your machine. Instructions can be found here: https://git-scm.com/downloads

Next step is to clone this repository to the place in your directory of your choosing: git clone https://github.com/hstrey/mRNA-analysis.git

Now start the jupyter notebook server by typing (cd into your copy of the repository): jupyter notebook