brew install gcc, errors in RHEL6 with centos6 repository about linuxbrew-core

[rwhogg]

Hi @kaji331, can you please do a brew gist-logs gmp and report the output here? Thanks!

[kaji331]

I am sorry. I am an beginner, so I don't know how to get the report of brew gist-logs...

---

发件人: Bob W. Hogg [email protected]
发送时间: 2016年5月23日 9:20
收件人: Linuxbrew/homebrew-core
抄送: kaji331; Mention
主题: Re: [Linuxbrew/homebrew-core] brew install gcc, errors in RHEL6 with centos6 repository (#306)

Hi @kaji331https://github.com/kaji331, can you please do a brew gist-logs gcc and report the output here? Thanks!

―
You are receiving this because you were mentioned.
Reply to this email directly or view it on GitHubhttps://github.com//issues/306#issuecomment-220869343

[rwhogg]

I am sorry. I am an beginner, so I don't know how to get the report of brew gist-logs...

No worries!

I just meant to run "brew gist-logs gmp" in your terminal and paste the URL it displays here.

[kaji331]

@rwhogg https://gist.github.com/4e97978be044a5aeaff07aa5d1fa6247

[rwhogg]

GCC-compiled programs appear to be segfaulting: ./configure: line 5829: 16716 Segmentation fault (core dumped) ./a.out.

Does GCC work at all for you?

Can you try compiling this program in two different ways and see what happens when you run it?

#include <stdio.h>
int main(int argc, char** argv)
{
    printf("Hi");
}

First way: gcc file.c
Second way: gcc -Os -w -pipe -march=native -isystem/home/cancer/.linuxbrew/include file.c

[kaji331]

@rwhogg Maybe my gcc is ok. Both of two methods showed nothing and generated an a.out file. If I execute a.out, the zsh showed:
Hi%

Thanks for your help 👍

[rwhogg]

No problem. Unfortunately, I don't have any further ideas about how to fix this. My apologies.

[sjackman]

patchelf is failing.

==> Pouring gmp-6.1.0.x86_64_linux.bottle.tar.gz
/home/cancer/.linuxbrew/Cellar/patchelf/0.9/bin/patchelf: error while loading shared libraries: libstdc++.so.6: cannot open shared object file: No such file or directory
Error: Failure while executing: /home/cancer/.linuxbrew/Cellar/patchelf/0.9/bin/patchelf --set-rpath /home/cancer/.linuxbrew/lib 

Please report

which -a patchelf
brew test patchelf
patchelf --version
ldd `which patchelf`
brew reinstall patchelf
which -a patchelf
brew test patchelf
patchelf --version
ldd `which patchelf`

[jrevillard]

I'm expecting the exact same issue when building everything from source on SL6 (I don't have the patchelf issue as I'm forcing installation from source).

Do you have an idea?

Best,
Jerome

[sjackman]

@kaji331 patchelf has recently been updated with a statically linked bottle that should resolve your issue. brew update && brew reinstall patchelf && brew install gcc

[sjackman]

@jrevillard Please report the error message that you're seeing and brew gist-logs FORMULA where FORMULA is the formula or dependency that failed to install.

[jrevillard]

@sjackman here it is: https://gist.github.com/anonymous/3172b3646e876c0df9aee10751f1a5c4

(as you can see I use my own repo but it's up to date with your today changes)

Best,
Jerome

[sjackman]

The relevant error is

configure:5820: /usr/bin/gcc -Os -w -pipe -march=native -isystem/cvmfs/neugrid.egi.eu/software/x86_64/test/linuxbrew/include conftest.c >&5
configure:5823: $? = 0
configure:5828: ./a.out || ./b.out || ./a.exe || ./a_out.exe || ./conftest
./configure: line 5829: 11740 Segmentation fault      (core dumped) ./a.out

https://gist.github.com/anonymous/3172b3646e876c0df9aee10751f1a5c4#file-config-log-L73-L76

Not a good situation. Is there a reason that you're compiling gmp from source rather than installing the precompiled binary bottle? Try

unset HOMEBREW_BUILD_FROM_SOURCE
brew install gmp

[sjackman]

When did this segfault issue first occur? I wonder what changed.

[jrevillard]

I'm compiling everything from source to see if it solve this other issue I just reported here: Linuxbrew/brew#66

I don't know exactly when it started. The last time I tried to compile from source was more than a year ago....