hms-dbmi / upset-altair-notebook

Jupyter Notebooks and other code for Altair-based Interactive UpSet Plots

upset-altair-notebook

Jupyter Notebooks for Altair-based Interactive UpSet Plots

Development

Notebook

Set up environments using Conda:

conda env create -f environment.yml

Start Jupyter with the Python kernel:

conda activate upset-altair-env
jupyter notebook

upset-altair-notebook's Issues

support list of colors or color scale

It would be great if the UpSetAltair function would support a list of colors or a color scale as input to control the set colors (as well as the highlighting color).

Support Vega/Vega-Lite output

Render the labels for horizontal bar charts only once for each set

In the horizontal bar charts on the bottom-right, multiple labels are rendered for a single set (e.g. "B") which is the reason why the shape of the labels look a bit noisy. We need to put only one label for individual sets.

Support a python package