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aquaskyline avatar aquaskyline commented on July 19, 2024

Not likely because we are preparing a new version called Clair3, we don't have a firm release date for it but it should be around May. In the new version, all models are trained on guppy >=3.6.0. Not sure about bonito because not much GIAB data were called using bonito at the moment.

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oneillkza avatar oneillkza commented on July 19, 2024

That's great news re: the new release!

For GIAB data, I'm pretty sure the fast5 are available for download (from the Shasta paper), and guppy 4.4.2 can run Bonito models, if you want to call it yourself.

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aquaskyline avatar aquaskyline commented on July 19, 2024

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aquaskyline avatar aquaskyline commented on July 19, 2024

Clair3 is now available at https://github.com/HKU-BAL/Clair3.

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