Related Issues (20)
- Parse gtf attributes and add them to Feature
- Add Type() to Stats interface
- Create a general method to output JSON from stats.Map
- Add stats for RNA-seq following IHEC specs
- Picard NH tag is not an unsigned integer
- Print usage when running without arguments
- Remove local GOPATH from panic stack trace
- Insert size stats give misleading average and standard deviation
- Switch to Go Modules
- Wrong merged intervals with unsorted annotation HOT 1
- Add protocol info to general stats
- No coverage stats if the annotation does not have `gene` elements HOT 1
- Difference between Two Histograms Produced HOT 2
- NH tag value can have multiple types in BAM format
- Usage of the command line tool HOT 2
- Option -t requires an argument! HOT 1
- Add QC failed/passed reads stats
- bamstats not working with Ensembl GTF (with "gene_biotype" attribute) HOT 2
- [Unintended] feature: bamstats fails if the number of BAM references exceeds ulimit -n
- Output only includes general statistics HOT 1
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