Comments (2)
Hi @usergsc,
thanks for reporting this.
A possible fix would be using a list of attributes when detecting rRNA
genes in the annotation. The list would include both gene_type
and gene_biotype
(in order) and use the first one available from each entry.
Best,
Emilio
from bamstats.
Hi Emilio,
It would be helpful if the list of expected GTF attributes are listed in the README file, so users are aware of the requirements, and can update their GTF files if necessary.
from bamstats.
Related Issues (20)
- Parse gtf attributes and add them to Feature
- Add Type() to Stats interface
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from bamstats.