Comments (3)
from Yasha:
- хорошо бы объяснить, что такое SSDEP и SSOUT. хоть в двух словах
- не ясно, куда будет все это устанавливаться. хорошо бы в комментариях написать.
в-третьих; - rm -rf — это очень опасно. например юзер не поняв напишет: $HOME
или
"$HOME / Documents /"
и все, нету у него больше файлов.
я бы советовал либо:
- убедиться, что файлы действительно нужно удалить из скрипта. в 90% случаев человек будет ставить с нуля, там файлов пока не будет.
- если файлы есть, может они не мешают?
- если известно, что мешают, написать сообщение: «Warning/Error: we found syn in ...; make sure to delete them before installation»
- если тебе самой часто приходится отлаживать и лень возиться, сделаю ключик какой-нибудь. и лучше что-нибудь вроде такого кода:
confirm () {
# call with a prompt string or use a default
read -r -p "${1:-Are you sure? [y/N]} " response
case $response in
[yY][eE][sS]|[yY])
true
;;
*)
false
;;
esac
}
confirm "Delete $nfiles files from $SSHDR? [y/N]" && rm ...
from secretsanta.
mv: cannot stat 'binByPlatform/binary-x86_64/*': No such file or directory
chmod: cannot access 'SS_dep/*': No such file or directory
(SecretSanta Installer) Untar signalp-2.0.Linux.tar.Z
(SecretSanta Installer) Untar signalp-3.0.Linux.tar.Z
(SecretSanta Installer) Untar signalp-4.1f.Linux.tar.gz
(SecretSanta Installer) Untar targetp-1.1b.Linux.tar.Z
(SecretSanta Installer) Untar tmhmm-2.0c.Linux.tar.gz
(SecretSanta Installer) Updating SS_dep/signalp-4.1/signalp
(SecretSanta Installer) Updating SS_dep/signalp-2.0/signalp
(SecretSanta Installer) Updating SS_dep/signalp-3.0/signalp
(SecretSanta Installer) Updating SS_dep/targetp
(SecretSanta Installer) Cloning WoLFPSort repository
Cloning into 'WoLFPSort'...
remote: Counting objects: 109, done.
remote: Total 109 (delta 0), reused 0 (delta 0), pack-reused 109
Receiving objects: 100% (109/109), 11.17 MiB | 8.18 MiB/s, done.
Resolving deltas: 100% (40/40), done.
Checking connectivity... done.
mv: cannot stat 'binByPlatform/binary-x86_64/*': No such file or directory
(SecretSanta Installer) Updating tmhmm and tmhmmformat.pl
(SecretSanta Installer) Updating ~/.profile
from secretsanta.
current version: https://gist.github.com/gogleva/3d60be51328ca7703cbd52b5fba2baee
from secretsanta.
Related Issues (20)
- pkgdown fails to update docs HOT 1
- parse_signalp HOT 1
- add filtering arguments/threshold for tibbles
- check_khdel() - restrict to piper mode HOT 1
- check_khdel() - adopt PROSITE pattern for ER-retention signals HOT 1
- implement topcons wrapper
- implement topcons wrapper HOT 4
- signalp() - 2,3: add prediction_type argument HOT 3
- signalp(): 4.0, 4.1 - sensitive mode HOT 2
- signalp(version = 4) - is broken HOT 1
- re-test examples HOT 1
- re-define CBSResult class HOT 3
- shortcut/documentation to secretome annotations for model species HOT 2
- docker HOT 1
- ?SecretSanta from the console HOT 1
- continuous integration vignette HOT 1
- consistent syntax in status and error messages HOT 1
- Error in .wrap_in_length_one_list_like_object HOT 2
- Problem using targetp 2.0c linux
- docker (??)
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from secretsanta.