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genome-projection

Genome projection library

genomefeaturecomponent

Provides SVG View for Genome Features rendered with the Apollo Track Web Service from JBrowse data React Component

genomefeaturespythonwidget

Jupyter Notebook widget that will automatically launch genome widgets

gff-js

parse and format streams of GFF3, for node or webpack

gff3_validator

Online and command-line GFF3 validator

gmod-rpc-perl

Perl libraries for implementing GMOD-RPC

gmod-web

Issues with or about, and tools for the GMOD website (currently a wiki)

gmod_svn_migration

Scripts and data used to migrate GMOD projects from svn on SourceForge to git on GitHub

gtf-js

GTF parsing library in JavaScript

indexedfasta-js

Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi

ixixx-js

jb2export

A CLI program to generate static image exports for jb2

jb2profile

jbconnect

JBConnect, an optional server-side component of JBrowse

jblast-jbconnect-hook

JBrowse/Galaxy-Blast Plugin

jbrowse

JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

jbrowse-components

Source code for JBrowse 2, a modern React-based genome browser

jbrowse-docker

JBrowse docker project

jbrowse-docker-examples

Collection of JBrowse docker examples

jbrowse-jupyter

A python package for showing JBrowse views

jbrowse-jupyter-tutorial

A demo of using jupyter-jbrowse locally

jbrowse-plugin-gdc

JBrowse 2 plugin for integrating with GDC resources

jbrowse-plugin-icgc

JBrowse 2 plugin to provide connectivity with the ICGC

jbrowse-plugin-ideogram

JBrowse 2 plugin for rendering ideograms

jbrowse-plugin-list

List of plugins for the JBrowse 2 plugin store.

jbrowse-plugin-msaview

multiple sequence alignment browser plugin for JBrowse 2

jbrowse-plugin-multilevel-linear-view

JBrowse 2 plugin that adds a linear genome view that can show multiple zoom levels

jbrowse-plugin-protein3d

3D protein structure visualizer in jbrowse 2 - WIP

jbrowse-plugin-quantseq

External JB2 plugin implementing a QuantitativeSequence track for displaying base-resolution models.

jbrowse-plugin-reactome

JBrowse 2 plugin integrating with Reactome