Coder Social home page Coder Social logo

gkoulouras / pdb-amino-acid-ratio Goto Github PK

View Code? Open in Web Editor NEW
0.0 1.0 0.0 544 KB

A console application for the ration calculation of amino acids from a PDB file.

Home Page: http://apps.grigoriskoulouras.com/software/PDBAminoAcidsRatio_ver_1.0.zip

Visual Basic 100.00%
pdb pdb-files bioinformatics-analysis bioinformatics-scripts bioinformatics-data

pdb-amino-acid-ratio's Introduction

PDB-amino-acid-ratio

A console application for the estimation of the ratio of amino acids from PDB-formatted files.
A user will be requested to declare the full path of the directory which contains the .pdb files. The script takes into account only rows start with the Record Type "ATOM".

For more information about the Protein Data Bank format please visit the following link:
https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/tutorials/pdbintro.html

You can directly download the executable application from the following link http://apps.grigoriskoulouras.com/software/PDBAminoAcidsRatio_ver_1.0.zip

PDB-amino-acid-ratio is an open source console application available freely to all users.
This console application is written in VB.NET using the Framework 4.5.2

Main Screen

Main_Screen

Sample of the output file

Amino_Acids_Ratio

pdb-amino-acid-ratio's People

Contributors

gkoulouras avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.