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Howdy y'all šŸ‘‹

  • šŸ”­ Iā€™m currently working on: statistical genetics/genomics/epigenomics applied to cancers, Alzheimer's and other neurodegenerative diseases, and substance use disorders (opioid use disorder specifically)
  • šŸŽ“ My CV is: https://gabriel.quarto.pub/cv/
  • šŸŒ± Iā€™m currently learning: a lot, including some basic bioinformatics, some basics about substance use disorders, and more data science skills
  • šŸ‘Æ Iā€™m looking to collaborate on: some R/CRAN and R/Bioconductor packages, like
    • pathwayPCA: gene-set (pathway) based PCA
    • coMethDMR: regions of differential co-methylation
    • tidyREDCap (with @RaymondBalise): helper functions to deal with REDCap data
    • DOPE (with @labouz): the Drug Ontology Parsing Engine
    • CTNote: NIDA Clinical Trials Network Outcomes, Treatments, and Endpoints
  • āš” Fun fact: I'm a vagrant--I live in Miami while claiming Texas and Wisconsin as "home". Also, I'm an ordained and active (eastern-rite) Catholic priest
  • šŸ¤” Iā€™m looking for help with: finding jobs for my master's and PhD students (HMU if you have open entry-level biostat/data science positions)
  • šŸ“« How to reach me: Email: gabriel DOT j DOT odom AT gmail DOT com; Twitter: @RevDocGabriel

Gabriel J. Odom's Projects

dials icon dials

Tools for creating tuning parameter values

dmrcompare icon dmrcompare

Full package version of the scripts in the DMRcomparePaper repository

hldr icon hldr

Heteroscedastic Linear Dimension Reduction

iamcomparison icon iamcomparison

Comparison of Integrative Analysis Methods for Multilevel OMICS Data

lasagne icon lasagne

Test Repo from the Python shortcourse

longnhanes icon longnhanes

Wrangling and cleaning scripts for a small collection of longitudinal NHANHES datasets

miami_covid19_case_study icon miami_covid19_case_study

Scripts used to wrangle and plot COVID-19 testing, hospitalisation, deaths, and death delay data for Miami-Dade County in Florida

msahelper icon msahelper

Helper Functions for Multiple Sequence Alignment Data

mvmonitoring icon mvmonitoring

Package repository for Multi-State Multivariate Process Monitoring with MSAD-PCA

pathwaypca icon pathwaypca

integrative pathway analysis with modern PCA methodology and gene selection

pathwaypcadata icon pathwaypcadata

this is a repository for storage data to reduce the package size

qsc_miami icon qsc_miami

Notes and material for invited sessions at the Sylvester Comprehensive Cancer Center's Quantitative Science Clinics

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