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Network layout algorithms

TODO

  • MDE
    • Generic Penalties
    • Push and Pull
    • Losses
    • Centered Constrain
    • Standardized Constrain
    • Anchored Constrains
    • Weights
    • Allows to choose the device (GPU)
    • Tests
    • Examples
    • Docs
  • HeliosFr
  • CuGraph ForceAtlas2
    • Tests
    • Docs
    • Examples

Network Representations

  • Basic abstract class for immutable networks (vertices, edges, edge attributes, vertex attributes, graph attributes). @filipinascimento
  • Integration with other libraries: igraph, networkx, graph-tool
  • C representation using CVNetwork
  • Mutable network class (support for existing network representations)

Error in "minigallery" directive: no content permitted.

This error happened after the commit 204e8ce. This commit makes the sphinx to expose the methods and attributes of class. Because this error the mini-gallery examples dosen't appear in any class or method inside of the documentation.

.../docs/source/_autosummary/helios.backends.fury.actors.rst:39: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.backends.fury.actors.".
.../docs/source/_autosummary/helios.backends.fury.actors.rst:53: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.backends.fury.actors.".
.../helios/backends/fury/tools.py:docstring of helios.backends.fury.tools.Uniform:11: WARNING: Unexpected indentation.
.../docs/source/_autosummary/helios.layouts.base.rst:22: WARNING: Error in "minigallery" directive:
no content permitted.

.. minigallery:: helios.layouts.base.is_running
   :add-heading:







   .. autoclass:: NetworkLayout
      :members:
      :show-inheritance:
      :inherited-members:
      :special-members: __call__, __add__, __mul__


            .. _sphx_glr_backref_helios.layouts.base.:
            .. minigallery:: helios.layouts.base.
               :add-heading:




   .. autoclass:: NetworkLayoutAsync
      :members:
      :show-inheritance:
      :inherited-members:
      :special-members: __call__, __add__, __mul__


            .. _sphx_glr_backref_helios.layouts.base.:
            .. minigallery:: helios.layouts.base.
               :add-heading:




   .. autoclass:: NetworkLayoutIPCRender
      :members:
      :show-inheritance:
      :inherited-members:
      :special-members: __call__, __add__, __mul__


            .. _sphx_glr_backref_helios.layouts.base.:
            .. minigallery:: helios.layouts.base.
               :add-heading:




   .. autoclass:: NetworkLayoutIPCServerCalc
      :members:
      :show-inheritance:
      :inherited-members:
      :special-members: __call__, __add__, __mul__


            .. _sphx_glr_backref_helios.layouts.base.:
            .. minigallery:: helios.layouts.base.
               :add-heading:
.../docs/source/_autosummary/helios.layouts.forceatlas2gpu.rst:39: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.layouts.forceatlas2gpu.".
.../docs/source/_autosummary/helios.layouts.ipc_tools.rst:39: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.layouts.ipc_tools.".
.../docs/source/_autosummary/helios.layouts.ipc_tools.rst:53: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.layouts.ipc_tools.".
.../docs/source/_autosummary/helios.layouts.mde.rst:39: WARNING: Duplicate explicit target name: "sphx_glr_backref_helios.layouts.mde.".

Visual aspects

  • Node and edge labels
  • Allow updating node scales
  • Allow change the 2d markers at runtime
  • PDF export
  • PNG export
  • Create new examples
  • Create CNAME for helios documentation and redirect

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