fredhutch / db4sci Goto Github PK

root@db4sci1:~# curl http://db4sci.org/install_demo.sh | bash 
-- Linux detected
-- Ubuntu detected
Checking for Docker
 -- Docker Installed
Docker version 18.09.2, is good
Checking for docker-compose
 -- docker-compose detected
Checking for DB4Sci git clone
Create directories
Pull Docker database images
sha256:1dfb94f13f5c181756b2ed7f174825029aca902c78d0490590b1aaa203abc052: Pulling from library/ubuntu
Digest: sha256:1dfb94f13f5c181756b2ed7f174825029aca902c78d0490590b1aaa203abc052
Status: Image is up to date for ubuntu@sha256:1dfb94f13f5c181756b2ed7f174825029aca902c78d0490590b1aaa203abc052
sha256:3792912862b389e10831b27cda0feb5d42363b30002ea8f56e35ff8a2af02df2: Pulling from library/mariadb
Digest: sha256:3792912862b389e10831b27cda0feb5d42363b30002ea8f56e35ff8a2af02df2
Status: Image is up to date for mariadb@sha256:3792912862b389e10831b27cda0feb5d42363b30002ea8f56e35ff8a2af02df2
sha256:e19acdab213d6318565a6da5fb824ca5161e99fe63dbc37036557aacb35fae51: Pulling from library/postgres
Digest: sha256:e19acdab213d6318565a6da5fb824ca5161e99fe63dbc37036557aacb35fae51
Status: Image is up to date for postgres@sha256:e19acdab213d6318565a6da5fb824ca5161e99fe63dbc37036557aacb35fae51
sha256:228b67b16c15ca470e0a9ecd52a7e3821bf9efca2ab631ca287f727fceee27ab: Pulling from library/postgres
Digest: sha256:228b67b16c15ca470e0a9ecd52a7e3821bf9efca2ab631ca287f727fceee27ab
Status: Image is up to date for postgres@sha256:228b67b16c15ca470e0a9ecd52a7e3821bf9efca2ab631ca287f727fceee27ab
sha256:aff0c497cff4f116583b99b21775a8844a17bcf5c69f7f3f6028013bf0d6c00c: Pulling from library/mongo
Digest: sha256:aff0c497cff4f116583b99b21775a8844a17bcf5c69f7f3f6028013bf0d6c00c
Status: Image is up to date for mongo@sha256:aff0c497cff4f116583b99b21775a8844a17bcf5c69f7f3f6028013bf0d6c00c
sha256:0ffc09487404ea43807a1fd9e33d9e924d2c8b48a7b7897e4d1231a396052ff9: Pulling from library/nginx
Digest: sha256:0ffc09487404ea43807a1fd9e33d9e924d2c8b48a7b7897e4d1231a396052ff9
Status: Image is up to date for nginx@sha256:0ffc09487404ea43807a1fd9e33d9e924d2c8b48a7b7897e4d1231a396052ff9
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100   617    0   617    0     0   3281      0 --:--:-- --:--:-- --:--:--  3281
100 11.2M  100 11.2M    0     0  8613k      0  0:00:01  0:00:01 --:--:-- 10.8M
Copy Config from example
Building DB4SCI container...
Building dbaas
Step 1/16 : FROM ubuntu:16.04
16.04: Pulling from library/ubuntu
7b722c1070cd: Pull complete
5fbf74db61f1: Pull complete
ed41cb72e5c9: Pull complete
7ea47a67709e: Pull complete
Digest: sha256:e4a134999bea4abb4a27bc437e6118fdddfb172e1b9d683129b74d254af51675
Status: Downloaded newer image for ubuntu:16.04
 ---> 7e87e2b3bf7a
Step 2/16 : RUN apt-get -y -qq update && apt-get -y -qq install     docker.io     python     python-dev     python-pip     postgresql-server-dev-all     libldap2-dev     libsasl2-dev     libldap2-dev     libssl-dev     libffi-dev     postgresql-client-9.5     libmysqlclient-dev     mariadb-client-10.0     apt-transport-https     ca-certificates     uwsgi     uwsgi-core     uwsgi-plugin-python     curl     software-properties-common
 ---> Running in 698a4b098ad6
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Selecting previously unselected package mariadb-client-core-10.0.
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Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common'
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Processing triggers for libc-bin (2.23-0ubuntu10) ...
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Setting up cron (3.0pl1-128ubuntu2) ...
Adding group `crontab' (GID 106) ...
Done.
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Setting up libsqlite3-0:amd64 (3.11.0-1ubuntu1) ...
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Setting up libglib2.0-0:amd64 (2.48.2-0ubuntu4.1) ...
No schema files found: doing nothing.
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Setting up libxdmcp6:amd64 (1:1.1.2-1.1) ...
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Setting up sgml-base (1.26+nmu4ubuntu1) ...
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Setting up perl (5.22.1-9ubuntu0.6) ...
update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode
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Setting up python (2.7.12-1~16.04) ...
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Creating /etc/network/interfaces.
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Setting up isc-dhcp-client (4.3.3-5ubuntu12.10) ...
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Setting up less (481-2.1ubuntu0.2) ...
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Setting up libbsd0:amd64 (0.8.2-1) ...
Setting up libnettle6:amd64 (3.2-1ubuntu0.16.04.1) ...
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Setting up libidn11:amd64 (1.32-3ubuntu1.2) ...
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Setting up libxtables11:amd64 (1.6.0-2ubuntu3) ...
Setting up logrotate (3.8.7-2ubuntu2.16.04.2) ...
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Setting up ucf (3.0036) ...
debconf: unable to initialize frontend: Dialog
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Setting up libapparmor-perl (2.10.95-0ubuntu2.10) ...
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Setting up libkeyutils1:amd64 (1.5.9-8ubuntu1) ...
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Setting up libgssapi-krb5-2:amd64 (1.13.2+dfsg-5ubuntu2.1) ...
Setting up libroken18-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libasn1-8-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libhcrypto4-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libheimbase1-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libwind0-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libhx509-5-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libkrb5-26-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
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Setting up libgssapi3-heimdal:amd64 (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ...
Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-14ubuntu0.1) ...
Setting up libsasl2-2:amd64 (2.1.26.dfsg1-14ubuntu0.1) ...
Setting up libldap-2.4-2:amd64 (2.4.42+dfsg-2ubuntu3.4) ...
Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d-1ubuntu0.1) ...
Setting up libcurl3-gnutls:amd64 (7.47.0-1ubuntu2.12) ...
Setting up apt-transport-https (1.2.29ubuntu0.1) ...
Setting up openssl (1.0.2g-1ubuntu4.14) ...
Setting up ca-certificates (20170717~16.04.2) ...
debconf: unable to initialize frontend: Dialog
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Setting up libcap-ng0:amd64 (0.7.7-1) ...
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Setting up gir1.2-glib-2.0:amd64 (1.46.0-3ubuntu1) ...
Setting up iptables (1.6.0-2ubuntu3) ...
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Setting up krb5-locales (1.13.2+dfsg-5ubuntu2.1) ...
Setting up libdbus-glib-1-2:amd64 (0.106-1) ...
Setting up libedit2:amd64 (3.1-20150325-1ubuntu2) ...
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Setting up libicu55:amd64 (55.1-7ubuntu0.4) ...
Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-14ubuntu0.1) ...
Setting up libxml2:amd64 (2.9.3+dfsg1-1ubuntu0.6) ...
Setting up libxmuu1:amd64 (2:1.1.2-2) ...
Setting up manpages (4.04-2) ...
Setting up openssh-client (1:7.2p2-4ubuntu2.7) ...
Setting up python-apt-common (1.1.0~beta1ubuntu0.16.04.2) ...
Setting up rsync (3.1.1-3ubuntu1.2) ...
invoke-rc.d: could not determine current runlevel
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Setting up xauth (1:1.0.9-1ubuntu2) ...
Setting up xdg-user-dirs (0.15-2ubuntu6.16.04.1) ...
Setting up xml-core (0.13+nmu2) ...
Setting up binutils (2.26.1-1ubuntu1~16.04.7) ...
Setting up bridge-utils (1.5-9ubuntu1) ...
debconf: unable to initialize frontend: Dialog
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Setting up libc-dev-bin (2.23-0ubuntu10) ...
Setting up linux-libc-dev:amd64 (4.4.0-142.168) ...
Setting up libc6-dev:amd64 (2.23-0ubuntu10) ...
Setting up libisl15:amd64 (0.16.1-1) ...
Setting up cpp-5 (5.4.0-6ubuntu1~16.04.11) ...
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Setting up libasan2:amd64 (5.4.0-6ubuntu1~16.04.11) ...
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Setting up make (4.1-6) ...
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update-alternatives: using /usr/bin/xz to provide /usr/bin/lzma (lzma) in auto mode
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Setting up curl (7.47.0-1ubuntu2.12) ...
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Setting up libnetfilter-conntrack3:amd64 (1.0.5-1) ...
Setting up dnsmasq-base (2.75-1ubuntu0.16.04.5) ...
Setting up libltdl7:amd64 (2.4.6-0.1) ...
Setting up docker.io (18.06.1-0ubuntu1.2~16.04.1) ...
debconf: unable to initialize frontend: Dialog
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Adding group `docker' (GID 110) ...
Done.
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Setting up libfakeroot:amd64 (1.20.2-1ubuntu1) ...
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update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
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Setting up libkadm5srv-mit9:amd64 (1.13.2+dfsg-5ubuntu2.1) ...
Setting up libkadm5clnt-mit9:amd64 (1.13.2+dfsg-5ubuntu2.1) ...
Setting up comerr-dev (2.1-1.42.13-1ubuntu1) ...
Setting up krb5-multidev (1.13.2+dfsg-5ubuntu2.1) ...
Setting up libaio1:amd64 (0.3.110-2) ...
Setting up libalgorithm-diff-perl (1.19.03-1) ...
Setting up libalgorithm-diff-xs-perl (0.04-4build1) ...
Setting up libalgorithm-merge-perl (0.08-3) ...
Setting up libdbi-perl (1.634-1build1) ...
Setting up mysql-common (5.7.25-0ubuntu0.16.04.2) ...
update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode
Setting up libmysqlclient20:amd64 (5.7.25-0ubuntu0.16.04.2) ...
Setting up libdbd-mysql-perl (4.033-1ubuntu0.1) ...
Setting up libexpat1-dev:amd64 (2.1.0-7ubuntu0.16.04.3) ...
Setting up libfile-fcntllock-perl (0.22-3) ...
Setting up libjansson4:amd64 (2.7-3ubuntu0.1) ...
Setting up zlib1g-dev:amd64 (1:1.2.8.dfsg-2ubuntu4.1) ...
Setting up libmysqlclient-dev (5.7.25-0ubuntu0.16.04.2) ...
Setting up libpq5:amd64 (9.5.14-0ubuntu0.16.04) ...
Setting up libssl-dev:amd64 (1.0.2g-1ubuntu4.14) ...
Setting up libpq-dev (9.5.14-0ubuntu0.16.04) ...
Setting up libpython2.7:amd64 (2.7.12-1ubuntu0~16.04.4) ...
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Setting up libpython-all-dev:amd64 (2.7.12-1~16.04) ...
Setting up libreadline5:amd64 (5.2+dfsg-3build1) ...
Setting up libsasl2-dev (2.1.26.dfsg1-14ubuntu0.1) ...
Setting up libsodium18:amd64 (1.0.8-5) ...
Setting up libssl-doc (1.0.2g-1ubuntu4.14) ...
Setting up libterm-readkey-perl (2.33-1build1) ...
Setting up libzmq5:amd64 (4.1.4-7) ...
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Setting up mariadb-common (10.0.36-0ubuntu0.16.04.1) ...
update-alternatives: using /etc/mysql/mariadb.cnf to provide /etc/mysql/my.cnf (my.cnf) in auto mode
Setting up mariadb-client-core-10.0 (10.0.36-0ubuntu0.16.04.1) ...
Setting up mariadb-client-10.0 (10.0.36-0ubuntu0.16.04.1) ...
Setting up netcat-traditional (1.10-41) ...
update-alternatives: using /bin/nc.traditional to provide /bin/nc (nc) in auto mode
Setting up netcat (1.10-41) ...
Setting up postgresql-client-common (173ubuntu0.2) ...
Setting up postgresql-client-9.5 (9.5.14-0ubuntu0.16.04) ...
update-alternatives: using /usr/share/postgresql/9.5/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode
Setting up ssl-cert (1.0.37) ...
debconf: unable to initialize frontend: Dialog
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Setting up postgresql-common (173ubuntu0.2) ...
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
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Adding user postgres to group ssl-cert

Creating config file /etc/postgresql-common/createcluster.conf with new version

Creating config file /etc/logrotate.d/postgresql-common with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
invoke-rc.d: could not determine current runlevel
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Setting up postgresql-server-dev-9.5 (9.5.14-0ubuntu0.16.04) ...
Setting up python-all (2.7.12-1~16.04) ...
Setting up python2.7-dev (2.7.12-1ubuntu0~16.04.4) ...
Setting up python-dev (2.7.12-1~16.04) ...
Setting up python-all-dev (2.7.12-1~16.04) ...
Setting up python-pip-whl (8.1.1-2ubuntu0.4) ...
Setting up python-pip (8.1.1-2ubuntu0.4) ...
Setting up python-pkg-resources (20.7.0-1) ...
Setting up python-setuptools (20.7.0-1) ...
Setting up python-wheel (0.29.0-1) ...
Setting up rename (0.20-4) ...
update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode
Setting up ubuntu-fan (0.12.8~16.04.2) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up uwsgi-core (2.0.12-5ubuntu3.2) ...
Setting up uwsgi (2.0.12-5ubuntu3.2) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libffi-dev:amd64 (3.2.1-4) ...
Setting up libldap2-dev:amd64 (2.4.42+dfsg-2ubuntu3.4) ...
Setting up uwsgi-plugin-python (2.0.12-5ubuntu3.2) ...
/var/lib/dpkg/info/uwsgi-plugin-python.postinst: 61: [: Illegal number: 
Setting up python3 (3.5.1-3) ...
running python rtupdate hooks for python3.5...
running python post-rtupdate hooks for python3.5...
Setting up lsb-release (9.20160110ubuntu0.2) ...
Setting up apparmor (2.10.95-0ubuntu2.10) ...
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
debconf: falling back to frontend: Readline
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
diff: /var/lib/apparmor/profiles/.apparmor.md5sums: No such file or directory
Setting up python3-apt (1.1.0~beta1ubuntu0.16.04.2) ...
Setting up python3-dbus (1.2.0-3) ...
Setting up python3-gi (3.20.0-0ubuntu1) ...
Setting up postgresql-server-dev-all (173ubuntu0.2) ...
Setting up python3-pycurl (7.43.0-1ubuntu1) ...
Setting up python3-software-properties (0.96.20.8) ...
Setting up software-properties-common (0.96.20.8) ...
Setting up unattended-upgrades (0.90ubuntu0.10) ...
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
debconf: falling back to frontend: Readline

Creating config file /etc/apt/apt.conf.d/20auto-upgrades with new version

Creating config file /etc/apt/apt.conf.d/50unattended-upgrades with new version
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up dh-python (2.20151103ubuntu1.1) ...
Processing triggers for systemd (229-4ubuntu21.15) ...
Processing triggers for libc-bin (2.23-0ubuntu10) ...
Processing triggers for ca-certificates (20170717~16.04.2) ...
Updating certificates in /etc/ssl/certs...
148 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for sgml-base (1.26+nmu4ubuntu1) ...
Processing triggers for dbus (1.10.6-1ubuntu3.3) ...
Removing intermediate container 698a4b098ad6
 ---> cd0983c8f271
Step 3/16 : RUN curl -fsSL https://download.docker.com/linux/ubuntu/gpg |     apt-key add - &&     add-apt-repository "deb [arch=amd64] https://download.docker.com/linux/ubuntu $(lsb_release -cs) stable" &&     apt-get -y -qq update &&     apt-get -y -qq install docker-ce
 ---> Running in 91c7b0cb5af4
OK
debconf: unable to initialize frontend: Dialog
debconf: (TERM is not set, so the dialog frontend is not usable.)
debconf: falling back to frontend: Readline
debconf: unable to initialize frontend: Readline
debconf: (This frontend requires a controlling tty.)
debconf: falling back to frontend: Teletype
dpkg-preconfigure: unable to re-open stdin: 
(Reading database ... 22170 files and directories currently installed.)
Removing docker.io (18.06.1-0ubuntu1.2~16.04.1) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of stop.
Selecting previously unselected package aufs-tools.
(Reading database ... 21971 files and directories currently installed.)
Preparing to unpack .../aufs-tools_1%3a3.2+20130722-1.1ubuntu1_amd64.deb ...
Unpacking aufs-tools (1:3.2+20130722-1.1ubuntu1) ...
Selecting previously unselected package containerd.io.
Preparing to unpack .../containerd.io_1.2.2-3_amd64.deb ...
Unpacking containerd.io (1.2.2-3) ...
Selecting previously unselected package docker-ce-cli.
Preparing to unpack .../docker-ce-cli_5%3a18.09.2~3-0~ubuntu-xenial_amd64.deb ...
Unpacking docker-ce-cli (5:18.09.2~3-0~ubuntu-xenial) ...
Selecting previously unselected package docker-ce.
Preparing to unpack .../docker-ce_5%3a18.09.2~3-0~ubuntu-xenial_amd64.deb ...
Unpacking docker-ce (5:18.09.2~3-0~ubuntu-xenial) ...
Processing triggers for libc-bin (2.23-0ubuntu10) ...
Processing triggers for systemd (229-4ubuntu21.15) ...
Setting up aufs-tools (1:3.2+20130722-1.1ubuntu1) ...
Setting up containerd.io (1.2.2-3) ...
Setting up docker-ce-cli (5:18.09.2~3-0~ubuntu-xenial) ...
Setting up docker-ce (5:18.09.2~3-0~ubuntu-xenial) ...
Installing new version of config file /etc/init.d/docker ...
Installing new version of config file /etc/init/docker.conf ...
update-alternatives: using /usr/bin/dockerd-ce to provide /usr/bin/dockerd (dockerd) in auto mode
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Processing triggers for libc-bin (2.23-0ubuntu10) ...
Processing triggers for systemd (229-4ubuntu21.15) ...
Removing intermediate container 91c7b0cb5af4
 ---> 6e31b5a83ad1
Step 4/16 : RUN mkdir /opt/dbaas &&     mkdir /mydb &&     mkdir /mydb/postgres_dbs &&     mkdir /mydb/db_backups &&     mkdir -p /var/run/postgresdb
 ---> Running in 9665ab42fe4b
Removing intermediate container 9665ab42fe4b
 ---> 0d8783a4fa9a
Step 5/16 : RUN groupadd -f --gid 999 dbaas
 ---> Running in 94b48e397df3
Removing intermediate container 94b48e397df3
 ---> 0db7f6a62c2f
Step 6/16 : RUN useradd -u 999 -g 999 -s /bin/nologin docker
 ---> Running in f6cff5ea67d7
Removing intermediate container f6cff5ea67d7
 ---> 912b7775efa1
Step 7/16 : ADD requirements.txt /opt/dbaas/
 ---> d5168e6a320b
Step 8/16 : RUN pip install pip==9.0.1 && pip install -r /opt/dbaas/requirements.txt
 ---> Running in c2a4e6ee207b
Collecting pip==9.0.1
  Downloading https://files.pythonhosted.org/packages/b6/ac/7015eb97dc749283ffdec1c3a88ddb8ae03b8fad0f0e611408f196358da3/pip-9.0.1-py2.py3-none-any.whl (1.3MB)
Installing collected packages: pip
  Found existing installation: pip 8.1.1
    Not uninstalling pip at /usr/lib/python2.7/dist-packages, outside environment /usr
Successfully installed pip-9.0.1
You are using pip version 9.0.1, however version 19.0.2 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
Collecting awscli (from -r /opt/dbaas/requirements.txt (line 1))
  Downloading https://files.pythonhosted.org/packages/78/e3/4e5b5f239881c2e9c4f39abc56de7a822d70ec6a5ac090d682bad31af185/awscli-1.16.101-py2.py3-none-any.whl (1.4MB)
Collecting backports.ssl-match-hostname (from -r /opt/dbaas/requirements.txt (line 2))
  Downloading https://files.pythonhosted.org/packages/ff/2b/8265224812912bc5b7a607c44bf7b027554e1b9775e9ee0de8032e3de4b2/backports.ssl_match_hostname-3.7.0.1.tar.gz
Collecting botocore (from -r /opt/dbaas/requirements.txt (line 3))
  Downloading https://files.pythonhosted.org/packages/75/6a/de557b897a67930cb8ba5df9d3088c0bd5d71e34b1c242984a04325d9754/botocore-1.12.91-py2.py3-none-any.whl (5.3MB)
Collecting chardet (from -r /opt/dbaas/requirements.txt (line 4))
  Downloading https://files.pythonhosted.org/packages/bc/a9/01ffebfb562e4274b6487b4bb1ddec7ca55ec7510b22e4c51f14098443b8/chardet-3.0.4-py2.py3-none-any.whl (133kB)
Collecting click (from -r /opt/dbaas/requirements.txt (line 5))
  Downloading https://files.pythonhosted.org/packages/fa/37/45185cb5abbc30d7257104c434fe0b07e5a195a6847506c074527aa599ec/Click-7.0-py2.py3-none-any.whl (81kB)
Collecting colorama (from -r /opt/dbaas/requirements.txt (line 6))
  Downloading https://files.pythonhosted.org/packages/4f/a6/728666f39bfff1719fc94c481890b2106837da9318031f71a8424b662e12/colorama-0.4.1-py2.py3-none-any.whl
Collecting cryptography (from -r /opt/dbaas/requirements.txt (line 7))
  Downloading https://files.pythonhosted.org/packages/17/fd/4c2c8953a9dfe38fbe0c3adafb6355540bd98cef70cc82734acb0a4c0e2f/cryptography-2.5-cp27-cp27mu-manylinux1_x86_64.whl (2.4MB)
Collecting DateTime (from -r /opt/dbaas/requirements.txt (line 8))
  Downloading https://files.pythonhosted.org/packages/73/22/a5297f3a1f92468cc737f8ce7ba6e5f245fcfafeae810ba37bd1039ea01c/DateTime-4.3-py2.py3-none-any.whl (60kB)
Collecting decorator (from -r /opt/dbaas/requirements.txt (line 9))
  Downloading https://files.pythonhosted.org/packages/f1/cd/7c8240007e9716b14679bc217a1baefa4432aa30394f7e2ec40a52b1a708/decorator-4.3.2-py2.py3-none-any.whl
Collecting docker-compose (from -r /opt/dbaas/requirements.txt (line 11))
  Downloading https://files.pythonhosted.org/packages/1e/6c/bf9879305530c4b765ef4eb3be76202788ca1037aec74d2c0ec73191d467/docker_compose-1.23.2-py2.py3-none-any.whl (131kB)
Collecting docker-py (from -r /opt/dbaas/requirements.txt (line 12))
  Downloading https://files.pythonhosted.org/packages/23/c7/1fd6d4d620809fe2f323869d719e2dd0086c939b67021303a9ec40f5a05b/docker_py-1.10.6-py2.py3-none-any.whl (50kB)
Collecting docker-pycreds (from -r /opt/dbaas/requirements.txt (line 13))
  Downloading https://files.pythonhosted.org/packages/f5/e8/f6bd1eee09314e7e6dee49cbe2c5e22314ccdb38db16c9fc72d2fa80d054/docker_pycreds-0.4.0-py2.py3-none-any.whl
Collecting dockerpty (from -r /opt/dbaas/requirements.txt (line 14))
  Downloading https://files.pythonhosted.org/packages/8d/ee/e9ecce4c32204a6738e0a5d5883d3413794d7498fe8b06f44becc028d3ba/dockerpty-0.4.1.tar.gz
Collecting docopt (from -r /opt/dbaas/requirements.txt (line 15))
  Downloading https://files.pythonhosted.org/packages/a2/55/8f8cab2afd404cf578136ef2cc5dfb50baa1761b68c9da1fb1e4eed343c9/docopt-0.6.2.tar.gz
Collecting docutils (from -r /opt/dbaas/requirements.txt (line 16))
  Downloading https://files.pythonhosted.org/packages/50/09/c53398e0005b11f7ffb27b7aa720c617aba53be4fb4f4f3f06b9b5c60f28/docutils-0.14-py2-none-any.whl (543kB)
Collecting enum34 (from -r /opt/dbaas/requirements.txt (line 17))
  Downloading https://files.pythonhosted.org/packages/c5/db/e56e6b4bbac7c4a06de1c50de6fe1ef3810018ae11732a50f15f62c7d050/enum34-1.1.6-py2-none-any.whl
Collecting Flask (from -r /opt/dbaas/requirements.txt (line 18))
  Downloading https://files.pythonhosted.org/packages/7f/e7/08578774ed4536d3242b14dacb4696386634607af824ea997202cd0edb4b/Flask-1.0.2-py2.py3-none-any.whl (91kB)
Collecting Flask-Script (from -r /opt/dbaas/requirements.txt (line 19))
  Downloading https://files.pythonhosted.org/packages/00/a4/cd587b2b19f043b65bf33ceda2f6e4e6cdbd0ce18d01a52b9559781b1da6/Flask-Script-2.0.6.tar.gz (43kB)
Collecting funcsigs (from -r /opt/dbaas/requirements.txt (line 20))
  Downloading https://files.pythonhosted.org/packages/69/cb/f5be453359271714c01b9bd06126eaf2e368f1fddfff30818754b5ac2328/funcsigs-1.0.2-py2.py3-none-any.whl
Collecting functools32 (from -r /opt/dbaas/requirements.txt (line 21))
  Downloading https://files.pythonhosted.org/packages/c5/60/6ac26ad05857c601308d8fb9e87fa36d0ebf889423f47c3502ef034365db/functools32-3.2.3-2.tar.gz
Collecting futures (from -r /opt/dbaas/requirements.txt (line 22))
  Downloading https://files.pythonhosted.org/packages/2d/99/b2c4e9d5a30f6471e410a146232b4118e697fa3ffc06d6a65efde84debd0/futures-3.2.0-py2-none-any.whl
Collecting idna (from -r /opt/dbaas/requirements.txt (line 23))
  Downloading https://files.pythonhosted.org/packages/14/2c/cd551d81dbe15200be1cf41cd03869a46fe7226e7450af7a6545bfc474c9/idna-2.8-py2.py3-none-any.whl (58kB)
Collecting ipaddress (from -r /opt/dbaas/requirements.txt (line 25))
  Downloading https://files.pythonhosted.org/packages/fc/d0/7fc3a811e011d4b388be48a0e381db8d990042df54aa4ef4599a31d39853/ipaddress-1.0.22-py2.py3-none-any.whl
Collecting itsdangerous (from -r /opt/dbaas/requirements.txt (line 26))
  Downloading https://files.pythonhosted.org/packages/76/ae/44b03b253d6fade317f32c24d100b3b35c2239807046a4c953c7b89fa49e/itsdangerous-1.1.0-py2.py3-none-any.whl
Collecting Jinja2 (from -r /opt/dbaas/requirements.txt (line 27))
  Downloading https://files.pythonhosted.org/packages/7f/ff/ae64bacdfc95f27a016a7bed8e8686763ba4d277a78ca76f32659220a731/Jinja2-2.10-py2.py3-none-any.whl (126kB)
Collecting jmespath (from -r /opt/dbaas/requirements.txt (line 28))
  Downloading https://files.pythonhosted.org/packages/b7/31/05c8d001f7f87f0f07289a5fc0fc3832e9a57f2dbd4d3b0fee70e0d51365/jmespath-0.9.3-py2.py3-none-any.whl
Collecting jsonschema (from -r /opt/dbaas/requirements.txt (line 29))
  Downloading https://files.pythonhosted.org/packages/77/de/47e35a97b2b05c2fadbec67d44cfcdcd09b8086951b331d82de90d2912da/jsonschema-2.6.0-py2.py3-none-any.whl
Collecting ldap3 (from -r /opt/dbaas/requirements.txt (line 30))
  Downloading https://files.pythonhosted.org/packages/54/93/55d4de43abf3af1b60befa648811538b49701237e5cbda456608384b25ac/ldap3-2.5.2-py2.py3-none-any.whl (393kB)
Collecting Mako (from -r /opt/dbaas/requirements.txt (line 31))
  Downloading https://files.pythonhosted.org/packages/eb/f3/67579bb486517c0d49547f9697e36582cd19dafb5df9e687ed8e22de57fa/Mako-1.0.7.tar.gz (564kB)
Collecting MarkupSafe (from -r /opt/dbaas/requirements.txt (line 32))
  Downloading https://files.pythonhosted.org/packages/bc/3a/6bfd7b4b202fa33bdda8e4e3d3acc719f381fd730f9a0e7c5f34e845bd4d/MarkupSafe-1.1.0-cp27-cp27mu-manylinux1_x86_64.whl
Collecting mock (from -r /opt/dbaas/requirements.txt (line 33))
  Downloading https://files.pythonhosted.org/packages/e6/35/f187bdf23be87092bd0f1200d43d23076cee4d0dec109f195173fd3ebc79/mock-2.0.0-py2.py3-none-any.whl (56kB)
Collecting mysqlclient (from -r /opt/dbaas/requirements.txt (line 35))
  Downloading https://files.pythonhosted.org/packages/73/79/67ddf24ac31b05d741f0ac87fa612c7a11bab1b39b8270ed7344d149f8af/mysqlclient-1.4.2.tar.gz (85kB)
Collecting ndg-httpsclient (from -r /opt/dbaas/requirements.txt (line 36))
  Downloading https://files.pythonhosted.org/packages/bf/b2/26470fde7ff55169df8e071fb42cb1f83e22bd952520ab2b5c5a5edc2acd/ndg_httpsclient-0.5.1-py2-none-any.whl
Collecting neo4j-driver (from -r /opt/dbaas/requirements.txt (line 37))
  Downloading https://files.pythonhosted.org/packages/fc/e2/ce6e4d08c0332e5cf501e4513872de5aca03f710bdb309cbc51f8daa7053/neo4j-driver-1.7.1.tar.gz
Collecting pbr (from -r /opt/dbaas/requirements.txt (line 38))
  Downloading https://files.pythonhosted.org/packages/8c/7f/fed53b379500fd889707d1f6e61c2a35e12f2de87396894aff89b017d1d6/pbr-5.1.2-py2.py3-none-any.whl (107kB)
Collecting pycodestyle (from -r /opt/dbaas/requirements.txt (line 39))
  Downloading https://files.pythonhosted.org/packages/0e/0c/04a353e104d2f324f8ee5f4b32012618c1c86dd79e52a433b64fceed511b/pycodestyle-2.5.0-py2.py3-none-any.whl (51kB)
Collecting pexpect (from -r /opt/dbaas/requirements.txt (line 40))
  Downloading https://files.pythonhosted.org/packages/89/e6/b5a1de8b0cc4e07ca1b305a4fcc3f9806025c1b651ea302646341222f88b/pexpect-4.6.0-py2.py3-none-any.whl (57kB)
Collecting psycopg2 (from -r /opt/dbaas/requirements.txt (line 41))
  Downloading https://files.pythonhosted.org/packages/51/89/7490c48abf2ea89b65140c3c77023f7ea623031389a8e0cd0788c1625b06/psycopg2-2.7.7-cp27-cp27mu-manylinux1_x86_64.whl (2.7MB)
Collecting ptyprocess (from -r /opt/dbaas/requirements.txt (line 42))
  Downloading https://files.pythonhosted.org/packages/d1/29/605c2cc68a9992d18dada28206eeada56ea4bd07a239669da41674648b6f/ptyprocess-0.6.0-py2.py3-none-any.whl
Collecting py2-ipaddress (from -r /opt/dbaas/requirements.txt (line 43))
  Downloading https://files.pythonhosted.org/packages/06/f2/ff20f2d2fd4757be329c8ecb81e9e7fa3bec0b65445821e3a575410cf194/py2-ipaddress-3.4.1.tar.gz
Collecting pyasn1 (from -r /opt/dbaas/requirements.txt (line 44))
  Downloading https://files.pythonhosted.org/packages/7b/7c/c9386b82a25115cccf1903441bba3cbadcfae7b678a20167347fa8ded34c/pyasn1-0.4.5-py2.py3-none-any.whl (73kB)
Collecting pycrypto (from -r /opt/dbaas/requirements.txt (line 45))
  Downloading https://files.pythonhosted.org/packages/60/db/645aa9af249f059cc3a368b118de33889219e0362141e75d4eaf6f80f163/pycrypto-2.6.1.tar.gz (446kB)
Collecting pymongo (from -r /opt/dbaas/requirements.txt (line 46))
  Downloading https://files.pythonhosted.org/packages/04/9c/18d54ce25a3219b13cf92616de87cac7a8e2eab26eb2947606010669d41c/pymongo-3.7.2-cp27-cp27mu-manylinux1_x86_64.whl (411kB)
Collecting PyMySQL (from -r /opt/dbaas/requirements.txt (line 47))
  Downloading https://files.pythonhosted.org/packages/ed/39/15045ae46f2a123019aa968dfcba0396c161c20f855f11dea6796bcaae95/PyMySQL-0.9.3-py2.py3-none-any.whl (47kB)
Collecting pyOpenSSL (from -r /opt/dbaas/requirements.txt (line 48))
  Downloading https://files.pythonhosted.org/packages/01/c8/ceb170d81bd3941cbeb9940fc6cc2ef2ca4288d0ca8929ea4db5905d904d/pyOpenSSL-19.0.0-py2.py3-none-any.whl (53kB)
Collecting python-dateutil (from -r /opt/dbaas/requirements.txt (line 49))
  Downloading https://files.pythonhosted.org/packages/41/17/c62faccbfbd163c7f57f3844689e3a78bae1f403648a6afb1d0866d87fbb/python_dateutil-2.8.0-py2.py3-none-any.whl (226kB)
Collecting python-editor (from -r /opt/dbaas/requirements.txt (line 50))
  Downloading https://files.pythonhosted.org/packages/55/a0/3c0ba1c10f2ca381645dd46cb7afbb73fddc8de9f957e1f9e726a846eabc/python_editor-1.0.4-py2-none-any.whl
Collecting python-ldap (from -r /opt/dbaas/requirements.txt (line 51))
  Downloading https://files.pythonhosted.org/packages/7f/1c/28d721dff2fcd2fef9d55b40df63a00be26ec8a11e8c6fc612ae642f9cfd/python-ldap-3.1.0.tar.gz (366kB)
Collecting pytz (from -r /opt/dbaas/requirements.txt (line 52))
  Downloading https://files.pythonhosted.org/packages/61/28/1d3920e4d1d50b19bc5d24398a7cd85cc7b9a75a490570d5a30c57622d34/pytz-2018.9-py2.py3-none-any.whl (510kB)
Collecting PyYAML (from -r /opt/dbaas/requirements.txt (line 53))
  Downloading https://files.pythonhosted.org/packages/9e/a3/1d13970c3f36777c583f136c136f804d70f500168edc1edea6daa7200769/PyYAML-3.13.tar.gz (270kB)
Collecting requests (from -r /opt/dbaas/requirements.txt (line 54))
  Downloading https://files.pythonhosted.org/packages/7d/e3/20f3d364d6c8e5d2353c72a67778eb189176f08e873c9900e10c0287b84b/requests-2.21.0-py2.py3-none-any.whl (57kB)
Collecting rsa (from -r /opt/dbaas/requirements.txt (line 55))
  Downloading https://files.pythonhosted.org/packages/02/e5/38518af393f7c214357079ce67a317307936896e961e35450b70fad2a9cf/rsa-4.0-py2.py3-none-any.whl
Collecting s3transfer (from -r /opt/dbaas/requirements.txt (line 56))
  Downloading https://files.pythonhosted.org/packages/d7/de/5737f602e22073ecbded7a0c590707085e154e32b68d86545dcc31004c02/s3transfer-0.2.0-py2.py3-none-any.whl (69kB)
Collecting simplegeneric (from -r /opt/dbaas/requirements.txt (line 57))
  Downloading https://files.pythonhosted.org/packages/3d/57/4d9c9e3ae9a255cd4e1106bb57e24056d3d0709fc01b2e3e345898e49d5b/simplegeneric-0.8.1.zip
Collecting six (from -r /opt/dbaas/requirements.txt (line 58))
  Downloading https://files.pythonhosted.org/packages/73/fb/00a976f728d0d1fecfe898238ce23f502a721c0ac0ecfedb80e0d88c64e9/six-1.12.0-py2.py3-none-any.whl
Collecting SQLAlchemy (from -r /opt/dbaas/requirements.txt (line 59))
  Downloading https://files.pythonhosted.org/packages/c6/52/73d1c92944cd294a5b165097038418abb6a235f5956d43d06f97254f73bf/SQLAlchemy-1.2.17.tar.gz (5.7MB)
Collecting texttable (from -r /opt/dbaas/requirements.txt (line 60))
  Downloading https://files.pythonhosted.org/packages/2e/e4/101fddb4f58143b810283f0ee438596eb241c0135cc9691f7d43794dbf90/texttable-1.6.0.tar.gz
Collecting urllib3 (from -r /opt/dbaas/requirements.txt (line 61))
  Downloading https://files.pythonhosted.org/packages/62/00/ee1d7de624db8ba7090d1226aebefab96a2c71cd5cfa7629d6ad3f61b79e/urllib3-1.24.1-py2.py3-none-any.whl (118kB)
Collecting websocket-client (from -r /opt/dbaas/requirements.txt (line 62))
  Downloading https://files.pythonhosted.org/packages/26/2d/f749a5c82f6192d77ed061a38e02001afcba55fe8477336d26a950ab17ce/websocket_client-0.54.0-py2.py3-none-any.whl (200kB)
Collecting Werkzeug (from -r /opt/dbaas/requirements.txt (line 63))
  Downloading https://files.pythonhosted.org/packages/20/c4/12e3e56473e52375aa29c4764e70d1b8f3efa6682bef8d0aae04fe335243/Werkzeug-0.14.1-py2.py3-none-any.whl (322kB)
Collecting zope.interface (from -r /opt/dbaas/requirements.txt (line 64))
  Downloading https://files.pythonhosted.org/packages/a2/a2/e68c37eb2ef9bf942e0ace19f4cf6fe3e7c650932fb587bfde3c608f7d77/zope.interface-4.6.0-cp27-cp27mu-manylinux1_x86_64.whl (164kB)
Collecting cffi!=1.11.3,>=1.8 (from cryptography->-r /opt/dbaas/requirements.txt (line 7))
  Downloading https://files.pythonhosted.org/packages/14/dd/3e7a1e1280e7d767bd3fa15791759c91ec19058ebe31217fe66f3e9a8c49/cffi-1.11.5-cp27-cp27mu-manylinux1_x86_64.whl (407kB)
Collecting asn1crypto>=0.21.0 (from cryptography->-r /opt/dbaas/requirements.txt (line 7))
  Downloading https://files.pythonhosted.org/packages/ea/cd/35485615f45f30a510576f1a56d1e0a7ad7bd8ab5ed7cdc600ef7cd06222/asn1crypto-0.24.0-py2.py3-none-any.whl (101kB)
Collecting docker<4.0,>=3.6.0 (from docker-compose->-r /opt/dbaas/requirements.txt (line 11))
  Downloading https://files.pythonhosted.org/packages/7e/3c/b610f22b170b0f8fe4d8f78974878e116562389f666f99e6549567eb9d87/docker-3.7.0-py2.py3-none-any.whl (133kB)
Collecting cached-property<2,>=1.2.0 (from docker-compose->-r /opt/dbaas/requirements.txt (line 11))
  Downloading https://files.pythonhosted.org/packages/3b/86/85c1be2e8db9e13ef9a350aecd6dea292bd612fa288c2f40d035bb750ded/cached_property-1.5.1-py2.py3-none-any.whl
Collecting neobolt<2,>=1.7.3 (from neo4j-driver->-r /opt/dbaas/requirements.txt (line 37))
  Downloading https://files.pythonhosted.org/packages/b0/4c/929d8295be2a1ffb42569f4aec83bd376e02977c0da69fde87cb62a1208e/neobolt-1.7.3.tar.gz (182kB)
Collecting neotime<2,>=1.7.1 (from neo4j-driver->-r /opt/dbaas/requirements.txt (line 37))
  Downloading https://files.pythonhosted.org/packages/0b/7e/ca368a8d8e288be1352d4e2df35da1e01f8aaffbf526695df71630bcb8a6/neotime-1.7.4.tar.gz
Collecting pyasn1_modules>=0.1.5 (from python-ldap->-r /opt/dbaas/requirements.txt (line 51))
  Downloading https://files.pythonhosted.org/packages/da/98/8ddd9fa4d84065926832bcf2255a2b69f1d03330aa4d1c49cc7317ac888e/pyasn1_modules-0.2.4-py2.py3-none-any.whl (66kB)
Collecting certifi>=2017.4.17 (from requests->-r /opt/dbaas/requirements.txt (line 54))
  Downloading https://files.pythonhosted.org/packages/9f/e0/accfc1b56b57e9750eba272e24c4dddeac86852c2bebd1236674d7887e8a/certifi-2018.11.29-py2.py3-none-any.whl (154kB)
Requirement already satisfied: setuptools in /usr/lib/python2.7/dist-packages (from zope.interface->-r /opt/dbaas/requirements.txt (line 64))
Collecting pycparser (from cffi!=1.11.3,>=1.8->cryptography->-r /opt/dbaas/requirements.txt (line 7))
  Downloading https://files.pythonhosted.org/packages/68/9e/49196946aee219aead1290e00d1e7fdeab8567783e83e1b9ab5585e6206a/pycparser-2.19.tar.gz (158kB)
Building wheels for collected packages: backports.ssl-match-hostname, dockerpty, docopt, Flask-Script, functools32, Mako, mysqlclient, neo4j-driver, py2-ipaddress, pycrypto, python-ldap, PyYAML, simplegeneric, SQLAlchemy, texttable, neobolt, neotime, pycparser
  Running setup.py bdist_wheel for backports.ssl-match-hostname: started
  Running setup.py bdist_wheel for backports.ssl-match-hostname: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/f1/ad/d7/c184cf1ef67b07f98565dc52f91ed4f9a759b7b46674b2fd76
  Running setup.py bdist_wheel for dockerpty: started
  Running setup.py bdist_wheel for dockerpty: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/e5/1e/86/bd0a97a0907c6c654af654d5875d1d4383dd1f575f77cee4aa
  Running setup.py bdist_wheel for docopt: started
  Running setup.py bdist_wheel for docopt: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/9b/04/dd/7daf4150b6d9b12949298737de9431a324d4b797ffd63f526e
  Running setup.py bdist_wheel for Flask-Script: started
  Running setup.py bdist_wheel for Flask-Script: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/1c/17/70/4598e6dba4bec58c1b59552c6409272aea31978ab8159f11a1
  Running setup.py bdist_wheel for functools32: started
  Running setup.py bdist_wheel for functools32: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/b5/18/32/77a1030457155606ba5e3ec3a8a57132b1a04b1c4f765177b2
  Running setup.py bdist_wheel for Mako: started
  Running setup.py bdist_wheel for Mako: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/15/35/25/dbcb848832ccb1a4b4ad23f529badfd3bce9bf88017f7ca510
  Running setup.py bdist_wheel for mysqlclient: started
  Running setup.py bdist_wheel for mysqlclient: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/58/e3/5d/a4b53302f15a216ad97cdf816870ca1062f4acee2e5d060849
  Running setup.py bdist_wheel for neo4j-driver: started
  Running setup.py bdist_wheel for neo4j-driver: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/93/10/17/db84bd8e4271df4dc66749d0be23dbc1d2583a7145dfd8c8d6
  Running setup.py bdist_wheel for py2-ipaddress: started
  Running setup.py bdist_wheel for py2-ipaddress: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/e7/e1/9b/f7cdf2798d2fe1e3b8cbdfbe27534aed81ece01c060fd0a2bb
  Running setup.py bdist_wheel for pycrypto: started
  Running setup.py bdist_wheel for pycrypto: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/27/02/5e/77a69d0c16bb63c6ed32f5386f33a2809c94bd5414a2f6c196
  Running setup.py bdist_wheel for python-ldap: started
  Running setup.py bdist_wheel for python-ldap: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/dd/c2/2f/2fed278648af625893327dffeb4cba33ae3c486fc49e1b2b2e
  Running setup.py bdist_wheel for PyYAML: started
  Running setup.py bdist_wheel for PyYAML: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/ad/da/0c/74eb680767247273e2cf2723482cb9c924fe70af57c334513f
  Running setup.py bdist_wheel for simplegeneric: started
  Running setup.py bdist_wheel for simplegeneric: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/a9/28/53/f24776b4c5bcbe91aaf1f1e247bd6fadd17191aa12fac63902
  Running setup.py bdist_wheel for SQLAlchemy: started
  Running setup.py bdist_wheel for SQLAlchemy: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/b3/94/e4/e556159f8d26575bfa3cf64cff277b9112f1ad8a50cc438bbb
  Running setup.py bdist_wheel for texttable: started
  Running setup.py bdist_wheel for texttable: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/6b/9a/65/2ed3c41a937f0f2780e8a0f0bca1f7182438bf62710beedd48
  Running setup.py bdist_wheel for neobolt: started
  Running setup.py bdist_wheel for neobolt: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/9f/40/fc/c8dd751e3526cdd30c3483a57d512998f3774172dc2430bf5f
  Running setup.py bdist_wheel for neotime: started
  Running setup.py bdist_wheel for neotime: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/d4/b4/c4/ab867cd0ac9e667f8cd269f9364fd1cb8ee75fe50f5ce97c79
  Running setup.py bdist_wheel for pycparser: started
  Running setup.py bdist_wheel for pycparser: finished with status 'done'
  Stored in directory: /root/.cache/pip/wheels/f2/9a/90/de94f8556265ddc9d9c8b271b0f63e57b26fb1d67a45564511
Successfully built backports.ssl-match-hostname dockerpty docopt Flask-Script functools32 Mako mysqlclient neo4j-driver py2-ipaddress pycrypto python-ldap PyYAML simplegeneric SQLAlchemy texttable neobolt neotime pycparser
Installing collected packages: urllib3, jmespath, six, python-dateutil, docutils, botocore, futures, s3transfer, PyYAML, pyasn1, rsa, colorama, awscli, backports.ssl-match-hostname, chardet, click, enum34, pycparser, cffi, asn1crypto, ipaddress, cryptography, pytz, zope.interface, DateTime, decorator, websocket-client, docker-pycreds, certifi, idna, requests, docker, dockerpty, docopt, texttable, cached-property, functools32, jsonschema, docker-compose, docker-py, MarkupSafe, Jinja2, itsdangerous, Werkzeug, Flask, Flask-Script, funcsigs, ldap3, Mako, pbr, mock, mysqlclient, pyOpenSSL, ndg-httpsclient, neobolt, neotime, neo4j-driver, pycodestyle, ptyprocess, pexpect, psycopg2, py2-ipaddress, pycrypto, pymongo, PyMySQL, python-editor, pyasn1-modules, python-ldap, simplegeneric, SQLAlchemy
Successfully installed DateTime-4.3 Flask-1.0.2 Flask-Script-2.0.6 Jinja2-2.10 Mako-1.0.7 MarkupSafe-1.1.0 PyMySQL-0.9.3 PyYAML-3.13 SQLAlchemy-1.2.17 Werkzeug-0.14.1 asn1crypto-0.24.0 awscli-1.16.101 backports.ssl-match-hostname-3.7.0.1 botocore-1.12.91 cached-property-1.5.1 certifi-2018.11.29 cffi-1.11.5 chardet-3.0.4 click-7.0 colorama-0.4.1 cryptography-2.5 decorator-4.3.2 docker-3.7.0 docker-compose-1.23.2 docker-py-1.10.6 docker-pycreds-0.4.0 dockerpty-0.4.1 docopt-0.6.2 docutils-0.14 enum34-1.1.6 funcsigs-1.0.2 functools32-3.2.3.post2 futures-3.2.0 idna-2.8 ipaddress-1.0.22 itsdangerous-1.1.0 jmespath-0.9.3 jsonschema-2.6.0 ldap3-2.5.2 mock-2.0.0 mysqlclient-1.4.2 ndg-httpsclient-0.5.1 neo4j-driver-1.7.1 neobolt-1.7.3 neotime-1.7.4 pbr-5.1.2 pexpect-4.6.0 psycopg2-2.7.7 ptyprocess-0.6.0 py2-ipaddress-3.4.1 pyOpenSSL-19.0.0 pyasn1-0.4.5 pyasn1-modules-0.2.4 pycodestyle-2.5.0 pycparser-2.19 pycrypto-2.6.1 pymongo-3.7.2 python-dateutil-2.8.0 python-editor-1.0.4 python-ldap-3.1.0 pytz-2018.9 requests-2.21.0 rsa-4.0 s3transfer-0.2.0 simplegeneric-0.8.1 six-1.12.0 texttable-1.6.0 urllib3-1.24.1 websocket-client-0.54.0 zope.interface-4.6.0
You are using pip version 9.0.1, however version 19.0.2 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
Removing intermediate container c2a4e6ee207b
 ---> 7d7397ad1cce
Step 9/16 : ENV env dev
 ---> Running in a7fdd377d964
Removing intermediate container a7fdd377d964
 ---> 6b34293b126c
Step 10/16 : ADD *.py /opt/dbaas/
 ---> 75d526507ce8
Step 11/16 : ADD TLS /opt/dbaas/TLS
 ---> e515e98b5fc6
Step 12/16 : ADD dbconfig /opt/dbaas/dbconfig
 ---> 9e3ac01c20f7
Step 13/16 : ADD mydb /opt/dbaas/mydb/
 ---> 4ec02d8ab6be
Step 14/16 : ADD uwsgi.ini /opt/dbaas/
 ---> 02c1eecead38
Step 15/16 : WORKDIR /opt/dbaas
 ---> Running in 4c97a8ab7f0f
Removing intermediate container 4c97a8ab7f0f
 ---> a01f1cf00065
Step 16/16 : CMD ["uwsgi", "--ini", "uwsgi.ini"]
 ---> Running in 43c6b02147fe
Removing intermediate container 43c6b02147fe
 ---> c71381e303c8
Successfully built c71381e303c8
Successfully tagged dbaas:1.7.0
Building web
Step 1/5 : FROM nginx:1.13.8
1.13.8: Pulling from library/nginx
Digest: sha256:0ffc09487404ea43807a1fd9e33d9e924d2c8b48a7b7897e4d1231a396052ff9
Status: Downloaded newer image for nginx:1.13.8
 ---> 9e988ed19567
Step 2/5 : COPY www/* /usr/share/nginx/html/
 ---> 970ed3f3c279
Step 3/5 : RUN if [ -e /etc/nginx/conf.d/default.conf ] ;then rm /etc/nginx/conf.d/default.conf ; fi
 ---> Running in 34f19fa4a54a
Removing intermediate container 34f19fa4a54a
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Step 4/5 : COPY demo.conf /etc/nginx/conf.d/
 ---> 5914b68f2ebe
Step 5/5 : CMD  ["nginx", "-g", "daemon off;"]
 ---> Running in 79d286678469
Removing intermediate container 79d286678469
 ---> 211ccdf76d05
Successfully built 211ccdf76d05
Successfully tagged mydb-web:1.0
Creating network "db4sci_default" with the default driver
Creating dbaas ... done
Creating mydb-web ... done

create database foo;

COMPOSE_VERSION=$(curl -s https://api.github.com/repos/docker/compose/releases/latest | grep 'tag_name' | cut -d\" -f4)
sudo curl -L "https://github.com/docker/compose/releases/download/${COMPOSE_VERSION}/docker-compose-$(uname -s)-$(uname -m)" -o /usr/local/bin/docker-compose && chmod +x /usr/local/bin/docker-compose

Creating network "db4sci_default" with the default driver
Creating dbaas ... done
Creating mydb-web ... done

mysql --host mydb --port 32246 --user test-database --password

mysql --host mydb --port 32246 --user testuser --password
Enter password:
ERROR 1045 (28000): Access denied for user 'testuser'@'rhino02.fhcrc.org' (using password: YES)