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Name: Federico López-Osorio
Type: User
Company: Queen Mary University of London
Location: London, UK
Name: Federico López-Osorio
Type: User
Company: Queen Mary University of London
Location: London, UK
Dynamic Documents for R
RNAseq analysis notes from Tommy Tang
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
Simple web scraping for R
simple overview of python, numpy, scipy, matplotlib functions that are useful for scientific work
scikit-learn: machine learning in Python
An imagemagick-like frontend to Biopython SeqIO
Toolkit for processing sequences in FASTA/Q formats
de novo sequence assembler using string graphs
My personal Shiny server
Windowed Adaptive Trimming for fastq files using quality
Some sleuth walkthroughs to help you get started
SNAPR: a bioinformatics pipeline for efficient and accurate RNA-seq alignment and analysis
GFF and GVF specification documents
Project Website:
Easily install and load packages from the tidyverse
:books: Simplified and community-driven man pages
A collection of scripts for processing fastq files in ways to improve de novo transcriptome assemblies, and for evaluating those assemblies.
Understand your transcriptome assembly
Clustering phylogenetic trees with python
Trinity RNA-Seq de novo transcriptome assembly
Tutorials on phylogenetic and phylogenomic inference
Uppmax-themed repository
The Jupyter Notebooks behind my OReilly report, "A Whirlwind Tour of Python"
Bioconnector Workshops
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.