prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
Home Page: https://bioconductor.org/packages/specL
prepare peptide spectrum matches for use in targeted proteomics using R and Bioconductor
Hello,
I'm receiving this error while trying to read the blib format retreived from Skyline:
`
read.bibliospec(db)
fetched 113 rows.
assigning 294 modifications ...
Error in*tmp*[[modifications$RefSpectraID[i]]] :
subscript out of bounds
In addition: Warning messages:
1: All arguments to RSQLite Driver are ignored.
2: RSQLite::dbGetException() is deprecated, please switch to using standard error handling via tryCatch().
3: Closing open result set, pending rows
`
Thank you for the help.
Hassan
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