Comments (2)
Hi @AlexisFon,
Thanks for using my package!
It seems a problem with the names of the list. Dashes are particularly problematic as they transform into dots when computing enrichment scores. To try to fix it, I also change them to retrieve the enrichment score columns from the metadata afterwards, but apparently, something went wrong along the way.
- Which version of SCpubr are you using?
- Can you try to remove any special characters from your names. I.E: INF-TAMs --> INFTAMs and Infla-TAMs --> InflaTAMs.
Let me know if the issue still persists after trying that!
Best,
Enrique
from scpubr.
Hi @AlexisFon,
Closing this issue for now. Feel free to reopen it in case the tips above did not help!
Best,
Enrique
from scpubr.
Related Issues (20)
- REQUEST | do_ViolinPlot | I want order to be added HOT 2
- Where is the function do_AzimuthAnalysisPlot HOT 1
- do_GroupwiseDEPlot with output of FindConservedMarkers HOT 1
- do_DotPlot Sequential palette, diverging, white on extreme low end HOT 1
- do_AzimuthAnalysisPlot is not an exported object from 'namespace:SCpubr' HOT 3
- Output of Featureplot and Dimplot are of different size HOT 1
- BUG | Do_FeaturePlot | Plotting multiple FeaturePlots with idents.highlight prints them in a line rather than a grid HOT 1
- Do_FeaturePlot | Set custom scales/limits OR copy Seurat::FeaturePlot keep.scale parameter HOT 2
- REQUEST | do_featureplot | shared espression of One or more genes HOT 1
- do_DiffusionMapPlot returns empty plots HOT 2
- Extract coordinated from do_CellularStatesPlot HOT 2
- ncol | do_DimPlot | ncol argument scaling combined plot differently to other plots HOT 3
- REQUEST | do_DimPlot | Create UMAP with Table HOT 1
- REQUEST | do_DotPlot | Allow duplicated features HOT 1
- BUG | do_FeaturePlot | diverging.palette argument is not working HOT 8
- BUG | do_VolcanoPlot | add gene tags based on logFC + pvalue HOT 1
- REQUEST | do_DotPlot | Reqeuest for the option "dot.min". HOT 1
- How to create custom mappings from p-values to annotation for BoxPlot HOT 1
- Show Genenames in featureplot for feature vector HOT 5
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from scpubr.