emanuelsoda / docker-conda-template

A template for the integration of conda with docker/singularity

Example of usage for conda in docker.

1. List the require packages in the file requirements.txt

2. Build the docker image: docker build -t mycondaimage . (use the name of your choice instead of mycondaimage)

3. Run : docker run mycondaimage python3 --version

On github, an action is configured to automatically build and deploy the docker image. It can be downloaded with the following commands (remember to change the path with your name and project'name):

Docker:

docker pull ghcr.io/arnaudceol/docker-conda-template:main

singularity:

singularity pull docker://ghcr.io/arnaudceol/docker-conda-template:main