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batch_pyabc's Introduction

Batch_pyABC

Batch scripts to allow dynamically allocate master/worker nodes for the redis implementation in pyABC

Start a parallel pyABC run:

run submit_job.sh with the follwing parameters:

  • port number
  • Number of nodes
  • queue name
  • job time
  • CPUSPERTASK
  • python script

To kill all running jobs:

run kill_all.sh

Please note that you need to change the python file to take two arguments (the port_number and the host_id). This can be done using the argparse package.

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