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mssng-db6-joint-genotype-merge-by-chr

mssng-db6-variant-metrics

mssng-db6-vqsr

mssng-db6-workflows

open-data-registry

A registry of publicly available datasets on AWS

oxford_nanopore_artic

WDL-based analyis of single-ended Oxford Nanopore SARS-CoV-2 reads using the ARTIC pipeline

pacbio

pacbio-trgt-pipeline

pacbio_cosa

SARS-CoV-2 analysis of PacBio reads using the CoSA pipeline

parabricks-wdl

Accelerated genomics workflows in the Workflow Description Language

pgp-canada-schema

Public Object Schema

pipeline

Pipeline Workflows

plenary-2020

plenary-resources-2020

Resources for the GA4GH 2020 Plenary.

presto

Official home of Presto, the distributed SQL query engine for big data

public-dnastack-cli

Public Release repo of the DNAstack CLI

publisher-connector-example-app

A starter app for creating a new connector for Publisher.

publisher-connector-spi

DNAstack Publisher Connector SPI

rhq

RHQ system management and monitoring framework

sample-workflows

Sample bioinformatics workflows

search-python-client

GA4GH and DRS search for DNAstack's Covidcloud

sentieon-amazon-omics

Sentieon pipelines for Amazon Omics

synthdnm

This tool allows for training de novo classifiers via creating "synthetic de novos" from private, inherited variants.

tables-api-cli

Dataset API Command-Line Interface

wdl-ci

Tools to validate and test WDL-based repositories. To be used as part of CI/CD pipelines

wdl-common

Fork of PacBio's wdl-common repo

wdl-mothur

wdl-mothur is a repository featuring a Workflow Description Language (WDL) pipeline for seamless processing of 16S rRNA data using Mothur, enabling reproducible and customizable analysis of microbial communities.

wdl4j

Java Bindings for Working with the Workflow Descriptor Language

workbench-azure-saas-accelerator

A reference example with sample code for developers interested publishing transactable, Software as a-Service offers in the Microsoft commercial marketplace.