djbajic / comets-python-toolbox Goto Github PK

I realized that some of parameters by default in cometspy differ versus COMETS parameters. why are there those differences? Is there a list of parameter values where I can see all of differences? I'd like to replicate few experiments made with COMETS with cometspy and to do that I need the same parameters for both.

I'm trying to follow the batch_test example in sample_workflow_for_recent_refactor.py and keep hitting the error:

FileNotFoundError: [Errno 2] No such file or directory: 'total_biomass_log_0x7fe60a05d690'

If I change the parameters to not write either logfile with 'writeTotalBiomassLog' = False and 'writeBiomassLog' = False I can bypass it but then I definitely can't plot the data.

When I parse the code in comets.py, it seems like there is a place to read the simulations results back in, but not actually any place that it is ever written. Any help you could provide would be enormously helpful.