di2ag / chp_client Goto Github PK

Hi @yakaboskic,

Our team member just noticed a problem in July 6 Standup meeting that ENSEMBL:ENSG00000102172 is not supported by CHP. Here is the issue on our github repo. I'm wondering if our CHP data needs to be updated for solving this problem or CHP itself doesn't support this gene (I realized that this gene is not in your supported curie list here). Thanks!

Hi @yakaboskic,

I'm Chunyu, from ARAX RTXteam. We've integrated your chp_client into our module before but recently met a problem about installment (Please see this issue).

We found that by using the previous method (pip install git+https://github.com/di2ag/chp_client#egg=chp_client) to install this package, we got an error ERROR: Command errored out with exit status 1: git submodule update --init --recursive -q Check the logs for full command output.

I also tried your new installment method:

pip3 install -r requirements.txt
python3 setup.py install 

However, I found two problems for this method.

1. This method can't be put into our requirements.txt

2. By using this method, I got another error saying ImportError: cannot import name 'build_query' from 'chp_client.query' (/home/ugrads/cqm5886/chp_client/chp_client/query.py) when I tried to import build_query by using from chp_client.query import build_query

Could you please help us for fixing this issue? Thanks so much!