derekbeaton / mariner Goto Github PK
View Code? Open in Web Editor NEWA (probably temporary) repository for BrainHack TO 2017 (aka MARINeR)
A (probably temporary) repository for BrainHack TO 2017 (aka MARINeR)
Preprocessing steps to do once subjects have been concat
Transform output individual subject tables into data matrices appropriate for input into
i.e.,
The current output of individual preprocessing is a list of subjects dataMatrixpreproc
original data matrix
run design
data design
preprocessed data
If the user does not provide a mask, an inclusive brain mask should be applied to reduce data size and eliminate out of brain voxels
Everyone have same number of TRs or trials for rows
Preprocessing steps to do for each subject
read in 4D nifti
Design read in now requires TR to condition mapping; should be expanded to convert timing/duration input to proper TR design
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